Solea senegalensis (Senegalese sole): 122786317
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Entry
122786317 CDS
T07721
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122786317 (scn1laa)
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122786317 (scn1laa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
PFF1_TM
Zip
New_glue
FUT8_N_cat
ATP-synt_B
Spem1
Motif
Other DBs
NCBI-GeneID:
122786317
NCBI-ProteinID:
XP_043908472
LinkDB
All DBs
Position
LG2:complement(11557426..11734967)
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AA seq
1986 aa
AA seq
DB search
MAQLVPPGPDSFRPFTRESLNAIERRIAQENAKKPKGEKKKRNDENVPKASRDLGTGKSL
PLLYRDIPKGMVSTPLEDLDPFYSNQKTFIVLNKGKTIYRFNAAPALYLLSPFNPLRKIS
IKILVHSLFNVVIMCTILANCAFMTLSRQPDWAKNVEYTFTAIYTSEFLIKVLAQGFCIG
KFTFLRDPWNWLDFSVIILAYVTEFVNLGNFSAIRIFRVLRAFKAISVIPGLKTIVGALF
QSVKKLSNVMILTVFCLSVFALIGLQLFMGHLKQKCVKIPRNISSYNGTDAFNLTEFRLN
SENHYRLPGKRDPLLCGNGSEAGQCPEGFVCLRVGKNPNYGYTSFDSFGWAFLSLFRLMT
QDYWEFLYQQTLRAAGKPYMLFFVLVIFLGSFYLINLILAVVAMAYEEQSQATIKEAKEK
EEEYQAMLEQLKQQQEDNQAAATVAATDTGQASDKAGGTESSSETSKLSSKSAKERRNRR
KKKKEEEGKGADEKFPKSESQDSIKKARCHFSVDANLLNYNMKSSSAHQSFLSFRGPPFS
PRRNSRTSLFSFRSQTQDVGSENEFADDENSIFEDNLNPRGSVFLPRAFDRRSSSMSQCS
FLSHLLFPASGIKHSSVDCNGVVSLVGGNSLPSSPVRLHLPKVTVDMASITDNADTPEAE
YRQASGGANQEYMDFLDGPEARQRALSTASVITSTMEELEESRQKCPACWNKFAQTFLIW
ECCPAWLKIKKLVKLIVMDPFADLTITICIVLNTLFMAMEHYPMTGRFSSMLKVGNQVFT
GIFTAEMVLKIIALDPYYYFQERWNIFDGIIVCLSMMELCLEKVGGMSVLRSFRLLRVFK
LAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKKYNDCVCKISPSCT
LPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGTPMCIIVYMMVMVIGNLVVLNLFL
ALLLSSFSADNLAATEDDRDTNNLKIAIARIHRGIAFAKSILRSSCNSVCLRNKKKRKAD
DKSLDELQKPFGPNGVPDHTIKDFPKNGNGDVTGVDKNGDKYIVSSKSDDSIMSFINNPS
LTITVPIAVGESDFENLNTEDFSSASSEPAGFHMTADDDGQLSSSEGSTVDGLPPGEGRE
SIDFELEESMDPDGCFPEDCVQKFQCCQVNVEVGWWKVWWTLRKTCFRIVEHNWFESFII
FMILLSSGALAFEDVYIEKRKTIKTVLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWC
WLDFLIVDVSLVSLVANTMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIP
SIFNVLLVCLIFWLIFSIMGVNLFAGKYYYCTNKISDEPLPTSLVKNRTDCEALPGTRWK
LHKINFDNVGAGYLALLQVATFKGWMEIMYAAVDSQANQEEQPEYEINLIMYLYFVVFII
FGAFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSN
KIQAYIFDFTTKQAFDIIIMVLIWLNMVAMMVETDEQSLEMENILYYINILFISIFTGEC
LLKMISLRHYFFINGWNIFDFIVVILSIIGMFLADMIEKYFVSPTLFRVIRLARIGRVLR
LIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREAGIDDLFNFE
TFGNSMICLFQITTSAGWDGLLAPLLNKNKDDCDPTKEHPGSLIVGDCGNPPVAIAFFVS
YIIICFLIVVNMYIAVILENFSVATEESADPLSEDDFEMFYEVWERFDPHATQFMEYNKL
AEFADTLEPPLRIAMPNRLELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQ
MEERFMASNPSKVSYEPITTTLRRKQEDMSAVVIQRAFRHYVKAIVAGKQSNTSYDVVQK
EKALTDNEIVVKDDLKKNQDTHQSELAPPTASQSSCNSVTTNGKNKYEKDKSEKEVVGKD
VQEQHE
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacttgtaccgccaggtccagacagcttccgtccttttactcgtgagtccctc
aatgccattgagagacggatcgctcaggagaacgccaagaaaccaaaaggcgagaagaaa
aaacgcaatgatgagaatgtgcccaaggccagccgtgacctgggaacaggcaaatcgctg
cctctcctgtacagggacatccctaaaggcatggtgtcgacaccgctggaggacctggac
cccttctacagtaatcagaaaacttttatagtattaaacaaaggaaagaccatctaccgc
ttcaacgccgctcctgccttgtacctcctgagtcctttcaaccctctaagaaaaatatca
atcaagattttggtgcactcattgttcaacgtggtgatcatgtgcaccatccttgccaac
tgtgcgttcatgacactgagtaggcagcctgactgggcaaagaatgtggagtacacattc
actgcaatctatacctctgaattcctcattaaagttttagctcaagggttctgtatcgga
aagttcacgtttctgagagatccctggaactggctggatttctctgtcattattttggcg
tatgtaacagagtttgtaaacctaggcaatttttcagctattcgcattttcagagtgctg
agagctttcaaagctatttcagttataccaggcctgaagaccatcgttggagcgttgttc
cagtcagtaaagaagctttccaatgtgatgatccttacagtcttctgcttaagcgtcttt
gcccttatagggttgcaactatttatgggccatttaaagcaaaagtgtgtaaagattcca
agaaacatttcatcatataatgggacagacgccttcaacttgactgaattcagactcaat
agcgaaaatcactatagacttccaggaaagcgagatccactgctctgtggaaatggcagt
gaagctgggcagtgtccagagggtttcgtttgccttcgggtgggaaagaaccccaactat
ggctacacaagcttcgactcatttggttgggccttcctttctttgtttagactgatgaca
caggattactgggaattcctttatcaacagacattgcgagcagccgggaagccgtacatg
ttgttctttgtgctggtgatattccttggttccttctacctgatcaaccttatcttggct
gtagtagccatggcctacgaggagcagagccaagccaccattaaagaggctaaggagaag
gaggaggagtatcaggccatgctggagcagctgaaacaacagcaagaggataatcaggca
gcagcaactgtagctgcgactgacactgggcaggccagtgacaaagctggcggcactgag
agctcttctgaaacctccaagctcagttctaaaagtgccaaggagagacgcaacaggcgg
aaaaaaaaaaaggaggaggagggcaaaggggctgatgagaaattccccaaatcggagtcg
caggacagtataaagaaggctcgctgccacttctctgtggacgcaaacctgctcaactac
aacatgaaaagctcctctgcacatcagtcctttctgagttttcgcggaccgccgttctcc
ccgagacggaacagcaggaccagccttttcagttttcgaagccaaacacaggacgtgggg
tcagagaatgagtttgccgacgatgagaacagtatttttgaggacaacctgaatccgcga
ggctctgtttttcttccccgagcgtttgatcgacgaagcagcagcatgagccagtgcagc
ttcttgtcacatctcctttttccagccagcgggatcaagcacagctcagtagactgtaat
ggggtagtgtccctggtgggtgggaattctctgccatcatcacctgtgaggctccacctg
cctaaagtgacagtggatatggcttccatcacagacaatgctgatacccctgaggcagag
tacagacaggccagtggaggagcaaaccaggagtatatggacttcctcgatggcccagag
gccagacagagagctcttagcacagctagtgtcattaccagcacaatggaggagcttgaa
gagtcgaggcagaagtgtcctgcttgctggaacaagtttgcccaaactttcctcatctgg
gaatgctgtccagcatggctgaagatcaagaagctggttaaacttattgtgatggacccg
tttgcagacctaaccatcaccatatgcatcgtacttaacacgttgtttatggcaatggag
cattatccaatgactgggcgtttctcctctatgctcaaagtgggaaatcaggttttcact
ggtatattcactgcggaaatggtcctcaagatcattgcactggatccatactattacttc
caggagaggtggaatatttttgatggaatcattgtctgtttaagcatgatggagctttgt
ttggaaaaagtgggtggcatgtctgttctgagatcgttccgactgctgagagtattcaag
ttggctaaatcatggcccactctaaacacactaatcaaaataattggcaattcagtgggg
gctttgggcaacctgaccctggtgctggctatcatcgtctttatctttgccgtggtgggc
atgcagctgtttggaaaaaaatacaatgactgtgtgtgtaaaatctcacccagctgcact
ctgccccgatggcacatgagtgacttcttccattcattcctcattgtgttccgagtgctt
tgtggagagtggatagagaccatgtgggactgtatggaggtggctgggacgcccatgtgc
atcattgtctacatgatggtcatggttattggaaaccttgtggtgctgaacctgttcctg
gccttgctgctgagttcctttagtgctgacaacctggcagcgacagaggatgacagggat
acgaacaatctgaagattgccattgcccggattcacagaggaatcgcttttgccaagtcc
atactccgcagcagctgcaacagtgtctgtctccggaacaagaagaaaaggaaggctgat
gacaaatcgcttgatgagcttcagaaaccttttggaccaaatggtgtccccgaccacacc
atcaaagactttccaaagaatggcaatggggatgtgactggagtggacaagaacggagac
aagtatatagtcagcagcaagagtgatgattctataatgtctttcatcaacaatccgagt
ctgactatcacggttcctatcgctgtgggggagtctgactttgaaaacctcaacacggag
gacttcagcagtgcctcctctgaaccagcaggattccatatgactgcagatgacgacggg
cagctcagctcctcagagggcagcacagtggatggtttgccacccggggaaggcagagag
tccattgactttgaacttgaagaatctatggatcctgatggctgctttcctgaagactgc
gtgcagaagttccagtgctgtcaggtgaatgtggaggtgggatggtggaaggtgtggtgg
acactaagaaagacctgtttccggatagtggagcacaactggtttgagagcttcatcatc
ttcatgatcctgctcagcagtggagcactggcatttgaagatgtctacattgagaagagg
aagaccataaaaactgtgttggagtttgcagacaaaatcttcacctacatcttcattctt
gagatgttattgaagtgggtggcgtatggatttgccaagtacttcacaaatgcctggtgc
tggttggacttcctcattgtggatgtgtcattggtcagcctggtggccaatactatggga
tattctgaactcggtcccatcaagtctttgagaaccctgcgagctttgaggcctctgaga
gcgttgtcgcggtttgagggcatgagggtggttgttaacgccctgctcggcgccattcct
tccatcttcaacgtgctgctggtatgtctcatattctggctcatcttcagcatcatgggc
gtcaacttatttgcggggaagtactactactgtaccaacaaaatctcagatgagcctctc
ccgacgtcactggtcaaaaacaggacggattgcgaagcactgccggggactcgctggaaa
cttcacaaaatcaactttgacaatgttggagccggttatctggcactgctgcaagtggct
acattcaagggctggatggaaatcatgtatgccgccgtggactcgcaagcaaatcaagaa
gagcaacctgagtatgagatcaacctgattatgtacctgtattttgttgtgttcatcata
tttggggccttcttcacactgaatctctttattggtgtcatcatagacaatttcaatcag
cagaagaaaaagtttggaggtcaggacatcttcatgactgaggagcagaagaaatactac
aatgccatgaaaaagctgggctcaaagaaaccacaaaaacctattccgagaccatcaaac
aagattcaagcgtacatctttgacttcacaacaaagcaggcgtttgatattataataatg
gttctgatatggctcaacatggtcgcaatgatggtggaaaccgacgaacagtcgctcgaa
atggaaaacattctctactacataaacatcttattcatttccatcttcacgggagagtgt
ttgttgaagatgatctctcttcgccattactttttcatcaatggttggaatatcttcgat
ttcatcgtcgtcattctctccatcattggtatgtttcttgctgacatgatagaaaagtat
tttgtttcgccaacactgttccgagtcatccgactggctcggatcggccgagtcctccgc
ctgattaaaagcgccaaaggaattcgcacccttttgtttgctttgatgatgtcacttcct
gccctgtttaacattggtctcctgctcttcttggtgatgtttatctacgctatctttggc
atgtcaaacttcgcttatgtcaagagggaggcgggcattgatgacctcttcaattttgag
acgtttggcaacagcatgatctgcttgttccagatcaccacctcggcagggtgggacggc
ctccttgctccccttctcaacaaaaacaaagatgattgtgaccctactaaggagcatcct
ggcagtttaattgtaggagactgtggaaaccctcctgtggcgattgctttctttgttagc
tacatcatcatctgtttcctgattgtggtgaatatgtacattgcagtcatcctggaaaac
ttcagcgtggccaccgaggagagcgcggacccactaagcgaggatgatttcgaaatgttt
tacgaggtatgggaaaggtttgatcctcatgcgacacagttcatggagtacaacaagctg
gcagaatttgcagatactttggagccgccgttacgcatagccatgcctaaccggcttgaa
ctgatctccatggatctacccatggtgagcggcgaacgcattcactgcttggatatcctg
ttcgcattcactaagcgtgttttaggggagggtggcgagatggatgtcctcagggggcag
atggaggagcgcttcatggcctccaacccttccaaggtgtcctacgagcccatcactacc
accttacgtcgcaaacaggaggacatgtcagccgtcgtcatccagcgagctttcaggcac
tatgttaaggcaattgtggccggcaagcaatcaaacacatcctatgatgtcgtccaaaag
gagaaagcactcactgacaacgagattgtcgtcaaggacgatctaaaaaaaaatcaagac
actcatcagagtgaactagcacctccaactgcctctcagtcgtcatgtaacagtgtgaca
acaaatggaaaaaacaaatatgaaaaggacaaaagtgaaaaggaggttgtgggcaaagat
gtccaagaacaacatgaataa
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integrated database retrieval system
