Solea senegalensis (Senegalese sole): 122786339
Help
Entry
122786339 CDS
T07721
Symbol
trit1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ssen01006
]
122786339 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122786339 (trit1)
Enzymes [BR:
ssen01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
122786339 (trit1)
Prenyltransferases [BR:
ssen01006
]
Compound prenylation
tRNA dimethylallyltransferase
122786339 (trit1)
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
122786339 (trit1)
Prokaryotic type
122786339 (trit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
zf-C2H2_jaz
AAA_33
AAA_16
zf-met
Hpr_kinase_C
AAA_22
PPV_E1_C
AAA_5
RNA_helicase
nSTAND3
OrsD
AAA_18
AAA
Motif
Other DBs
NCBI-GeneID:
122786339
NCBI-ProteinID:
XP_043908506
LinkDB
All DBs
Position
LG20:12023098..12057968
Genome browser
AA seq
462 aa
AA seq
DB search
MAASTLGVRCALRRAMVPSLVVILGATGTGKSKLAMEVVKRLQGEIISADSMQVYKGLDI
ITNKVTAEELAQCRHHMIGFVDPLVSGYTVVDFRNKALTLIEDMHSRNKLPVIVGGTNYY
IESLLWKVLLDTGQESEEADGGEEASKRKLELEKLEGSELHKRLAEVDPKMAATLHPNNK
RRIARSLQIHEDTGIPHSHWLEEQRGQEGSSELGGPLRYPDPCIFWLHADMEALDKRLDA
RVDEMLSAGLIEELRDFHVRFNQQKVQDDSQSYQHGIFQSIGFKEFHDYLTAPESSTQQE
RDSLRDTGIEAVKIATKRYARKQNKWVRNRFLKRPGDNVPPVYGLDVTDVSRWEETVLNP
ALQILDSLCKGEEPTVPPIRVQEAGQKNKRNLRVCDLCDKVILGDLEWTAHLKSKKHHYH
VRKKRKTDPACDQITAGDETFSEDAVASQDARTTHEEIPVTL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccactctcggcgtgcgctgcgccctgcggagagcgatggtcccgtcgctg
gtggtgattctcggggccaccggcaccggcaagtccaagctggcgatggaggtcgtgaag
cggcttcagggggaaataatcagcgccgactccatgcaggtgtacaagggcctcgacatc
atcacgaataaggtgaccgccgaggagctggcccagtgcagacatcacatgatcggcttt
gtggacccgctggtcagcggctacacggtggtggacttcaggaacaaagccctgacgctc
atagaggacatgcacagcagaaacaaactaccagtcattgttggagggacaaattattac
attgagtctctgctgtggaaagtcttgttggacaccgggcaggagagcgaggaggccgat
ggaggagaagaagcttcgaaaaggaagttagagctggaaaagctggaaggatccgagtta
cacaaacgactggcggaggtggaccccaaaatggcggccacgttgcaccccaataacaaa
cgcaggattgccaggagccttcaaattcacgaggatacaggcatccctcatagccactgg
ttggaggagcagagggggcaggagggaagcagtgaactgggggggccactgaggtacccg
gacccatgcattttctggctgcatgccgatatggaggcactcgacaagaggctggatgct
cgcgtggatgagatgttgtccgcgggactgatcgaggagctcagggacttccacgtgcgc
ttcaatcagcagaaagtccaggatgacagccagagctaccagcatgggattttccagtcg
attggtttcaaggagtttcatgactacctgaccgctcctgaaagcagcacccagcaggag
agagactcacttcgagacacaggtatagaagctgtgaagattgctacaaagcgttatgcc
cgcaaacagaataagtgggtccggaaccgcttccttaaacgacctggagacaacgtgcct
ccagtgtacggcctggatgtgacggacgtgtcgcggtgggaggagacggtgctgaaccct
gcactgcagatactggacagtctctgtaagggtgaagagccgaccgttccaccaatcaga
gtgcaggaggcgggacagaaaaacaaacggaatctgcgcgtgtgcgatctgtgcgacaaa
gtcatcctcggtgacctggagtggacggctcacctgaagtctaagaagcatcactatcac
gtgaggaagaagaggaagactgaccccgcctgtgaccagatcactgcaggagacgagacg
ttctcagaggacgccgttgcttcccaggacgccaggacgacgcacgaggaaataccggtg
acactttag
DBGET
integrated database retrieval system
