Solea senegalensis (Senegalese sole): 122786355
Help
Entry
122786355 CDS
T07721
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122786355 (vps50)
Membrane trafficking [BR:
ssen04131
]
Protein recycling
Others
EARP complex
122786355 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
122786355
NCBI-ProteinID:
XP_043908541
LinkDB
All DBs
Position
LG20:9779235..9874884
Genome browser
AA seq
992 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQSIDPQAEQEIINSIEEV
YFSNDSFDMVQHELEKLPLELNLLELEEHRDKLKRQQAAVSKKVADLILEKQTAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKQKNSPDDAA
AAADSDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIA
QLHEFKFMGQCRSPSVSPNRQAMSSNSPAQEELCLFHQFLQEGNPFEMHIEQKEEETEDV
LASNGYESDELEKSVYQEYDSDSDVPEELKQDYVDEQTGDAPLKSVSRETIRSKKKSDYN
LNKINAPILTNTTLNVIRLVGKYMQMMSILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MPVPSPSLPTHGGREAGTARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDVEALGEN
AGVHGPAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDT
MMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQH
NVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNE
GRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQL
ANLVNVCLGSHINKRARQKLLAAIDDIDRPKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctcatggcccggcagggtctgaaaagtcctcaggagagcatg
gcagatcttagtcctgtagagaacctgaggatcccgagcaaggaggagttgcgggaactg
agggagcaatccattgacccccaggcagagcaggagatcatcaacagcatcgaggaggtc
tacttctccaacgactctttcgacatggtgcagcacgaactggagaagcttccacttgag
ctgaatctgctggagctggaggagcatagagacaagctgaagagacaacaggcagcagtt
tctaaaaaggttgcagatcttattctggagaaacagactgcttatgtcaaggaactggaa
agagtgacagccttacagacgaacctacagctggcagctgtcatttgcactaacgcgagg
agacaacttagtgtggcgaaagagggattcacagaggccagcctgggtttactggccaat
cagagaaggcgacaactgctgaccggcttgctcaagtctctgaggaccattaagacactg
caaagaaccgatgtaagactcagcgagatgcttgaggaggaagattatcccggtgcaatc
cagctctgtttggaatgtcagaaagctgccagcacctttaaacactacagctgcatcagt
gaattgaattccaaactgcaagacactttggagcaaattgaggagcagcttgacgtcgcc
ctgtccaagacctgtaagcactttgatgtttcgcactacaccaaagtccagctggcctac
acactcctgggcaagacacagactgctatggaccaactacacatgcacttcacccaggcc
atccataacactgtgttccaagtagtgctgggatatgtggagctgtgtgccggcaatgct
gacaccaagttccagaagatgcaatataaggacctgtgcacgcatattaccttggacagc
tacatcccctgtctgacagatctgtgcaaggcattgtgggaggtgatgctaagctactat
cgcaccatgcagtggcacgaagagcacgacaaacaaaagaattccccagatgatgcagca
gcagcagcagattctgatgagttggttgtggaccgcagttatgtaaagaagaaattggag
catggactgacgcggatctggcaggatgtccagttgaaagtgaaggcctacatcttgggg
acggacatgtccaacttcaaatatgatgattttatagtggtgctggatgtcatcagcagg
ttgatgcaggtgggcgaggagttctgtggcagcaagtctgaggtcctgcaggagtcgatc
aaacgccagagtgtcaactactttaaaaactatcacagggcacgtctggaagaactgagg
atgtttctggaaaatgagacgtgggaactttgtcctgtcaagtctaattttaacatcgcc
cagctccatgagttcaagttcatgggccagtgtcgctctccgtccgtgtccccgaacaga
caggccatgtcgtcgaactccccggcccaggaggagctgtgtctgttccatcagttcctt
caggagggaaacccgtttgagatgcacattgagcagaaagaggaggagacagaggacgtg
ctggcgtctaatggatatgagtcagacgagctggagaagagcgtgtatcaggaatacgac
agcgacagtgatgtccccgaggagctcaagcaggactacgtggatgagcagacgggcgac
gcccctctcaagagcgtttcccgagagaccataagaagcaagaaaaagtctgactacaac
ctaaataaaatcaacgcaccgatcctcaccaacaccactctcaacgtcatccggcttgtt
ggaaagtacatgcagatgatgagcattctgaagccgatcgccttcgatgtcatccactgt
gtgtctcagctctttgactactacctatacgctgtatacaccttctttggacgcaatgac
atgcctgtcccaagcccttctttgccaactcacggtggcagagaggcgggcactgccagg
gtggtgggccctgcttgcttgtacgagtcatcgggtctaggccttatcagcagccgatta
agaaccacactgaaccggatccaggagagcctcatagacgtggaagcactgggggagaac
gcaggtgtccacggcccagcggaggacaggaaggagaaggtgcccagcccacatctcagc
cagctggtggtcctcactaacagtggaactctttatgggttagctcagagagtggtggcc
actgagtctcttgtgtttttggcagaacagtttgagtccctccagtcccacctagacaca
atgatgcctgcagccaagaagcctttcctgcaacagttttattctcagacggtttctaca
gccagtgaactgcggaaacccatatactggatagtggccgccaaagccatcgactacgag
caaatgttactcatgatggctggagtgaaatgggacatcagggagataatgtcacagcac
aatgtgtatgtggacgtccttttaaaggagtttgagcaattcaacaagaggctgggtgat
gtttccagacatgtgcgcattccgctgcctgtgtccaacgtcttgtgggagcactgcatc
cgtctggccaacaggacgcttgtcgagggctacgccaatgtgaagaaatgtagcaatgag
ggccgggccctgatgcagctggacttccagcagttcctcatgaagctggagaagctgacc
gacctgcggcccatccccgataaagagtttgtggagacctacatcaaggcttattacctg
acggagaacgacatggagcagttcatcaagaatcacagggagtattccatgaagcagctc
gccaacttggtcaacgtgtgcctgggctcacacataaacaagagagctcgacagaaactg
ctggcggccatcgatgacattgacagacccaagcgatag
DBGET
integrated database retrieval system
