Solea senegalensis (Senegalese sole): 122786482
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Entry
122786482 CDS
T07721
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04136
Autophagy - other
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122786482 (atg13)
04136 Autophagy - other
122786482 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122786482 (atg13)
03029 Mitochondrial biogenesis [BR:
ssen03029
]
122786482 (atg13)
Membrane trafficking [BR:
ssen04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122786482 (atg13)
Atg1 complex
122786482 (atg13)
Mitochondrial biogenesis [BR:
ssen03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122786482 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122786482
NCBI-ProteinID:
XP_043908762
LinkDB
All DBs
Position
LG2:21815100..21829949
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AA seq
535 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTLEAKKALGGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHNYVILYRIYFGEVQLSGLGEGFQTVRVGVVSTPV
GTLTLSCAYRTNLAFMSNRQFDRSAPIMGIIVDHFVDPPCSNQRPANMGHPCNYRAPDEE
DGSPFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHTL
YSSRLYYQPSAELCHPAANPNQALHAGKEGGVALAPVQPHGVDAHLTVEHTPNTPGSSGD
DVGLSQSGEGKRDGGRRSDSPSDPVESLNEFTRKVGAFVNKPSSEITAASLDLPFAAFAP
RGLESEEDDLMVQPPASPPCPSPLQASLHSQGSEGSGQQDDFVMVDFKPAFSKDDLLPMD
LGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLALYEKNIDEFDAFVDMLH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctaagtccccaggataaaaaggacttggacaagttcattaagttcttt
gctttgaagactgttcaggtaatcgtccaagcccggcttggagagaaaatctgcactcgc
tcttcctcatcacctacaggctctgactggtttaatttggccatcaaagacatacctgag
gttactcttgaagccaagaaagcactgggtggacaactcccaggcatcggtcgctccatg
tgtgttgagatctccctgaagacatcagagggggattcaatggaattagagacatggtgt
ctggaaatgaatgaaaagtgcgataaggatatcaaggtgtcatacactgtctacaaccgt
ctgtctgtccttctcaagtctctgctggccatcaccagagtgacaccagcctataagctg
tccagaaagcagggacacaactatgttatattatacaggatctactttggggaagtgcag
ctcagtggattaggagaaggttttcagacagtgcgtgtcggcgtcgtcagcacccctgtc
ggcacactcacactctcatgtgcctaccgcaccaacctggcattcatgtctaacaggcag
tttgatcgatcggctcctatcatgggaatcatcgtggatcactttgtggatcctccgtgc
agcaaccagcgtcctgcaaacatggggcatccctgtaactacagagctccagatgaggag
gacggaagcccatttgcaggagttcaggattcacaggaggtctgcaccacctcattctcc
acctcccctccctctcagtgtgtgtgcacactgagtccgtctccctctaaactgtctaag
cccctccccctggacagtctgcagcttccattggctcctggacttgtcactcacactctt
tattcatccagattatactaccagccttctgctgagctctgtcaccctgctgctaatcca
aaccaggcattgcatgctgggaaagagggtggggttgcattggctcccgtccagccacat
ggagtagatgcccatctgacagtggaacacacccccaatacacctggcagcagtggtgat
gatgttggtctgtcacagagtggagaaggaaagagggacggagggaggaggagcgattct
ccctctgacccagtggagtcgctcaatgagttcacaaggaaagtgggagcctttgtcaat
aaacccagttcagagataacagcagccagtctggacctgccatttgctgcgtttgctcct
cgaggcttggagtcagaggaggatgacctaatggtgcagcctccagcctcccctccctgt
ccatccccgctgcaggccagccttcactctcaaggctcagaaggatcggggcaacaggac
gattttgtcatggtggactttaaacctgccttttctaaagacgacttgctgccaatggat
ctgggcaccttctacagagagtttcagaaccccccacaactggcaagcctctcactacac
atcagctcccagtccatggccgacgacctggactccctgccggagaaactggccctctac
gagaaaaacatcgatgagtttgacgcgtttgtggacatgctccattaa
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