Solea senegalensis (Senegalese sole): 122786488
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Entry
122786488 CDS
T07721
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04080
Neuroactive ligand-receptor interaction
ssen04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122786488 (thrb)
04081 Hormone signaling
122786488 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122786488 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssen03310
]
122786488 (thrb)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122786488 (thrb)
Nuclear receptors [BR:
ssen03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
122786488 (thrb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
122786488
NCBI-ProteinID:
XP_043908771
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All DBs
Position
LG20:complement(12297495..12383349)
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AA seq
485 aa
AA seq
DB search
MNYCVSDMYEMPHVNMGGGYALDQCMCPGEAQGFGHCEPQRLHHPPCVEQAWQPPQNYSC
SYAGGASVFKNDFYNMDVTLSHCLHQPEFFPDIKADFSHLQWMQEAHKKGYIPSYLDKDE
LCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKFEAKCVIDKVTRNQCQECR
FKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRREELQKTAWDRLEPTQEEWDLIRMV
TDAHMATNAQGNHWKQKRKFLSAAGVKEAKPEDIGHASMANTPEGNKVDIEAFSQFTKII
TPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAV
TRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLSSVEQIERCQ
EEFLLAFEHYINYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFL
EVFED
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcgtgtcagacatgtacgagatgcctcacgtcaacatgggaggaggctac
gcgctggatcagtgcatgtgtccaggtgaggctcaggggttcggacactgcgagccgcag
cgcctgcaccacccgccctgcgtggagcaagcgtggcagccgcctcagaactactcgtgc
tcgtacgccgggggagcgtccgtgtttaagaacgacttttacaacatggacgtcaccctg
agtcactgcctccatcagcccgagttcttccccgacattaaagcggatttctcacacctg
cagtggatgcaggaggcgcacaagaaagggtacataccaagctacctggacaaggatgag
ttatgtgtagtgtgcggggacaaagccacaggctatcactatcgctgcatcacctgtgaa
ggttgtaagggtttcttcaggaggacgatccagaagaatctgaacccgacctacgcctgc
aagtttgaggccaaatgtgtcatcgacaaagtgacgaggaaccagtgtcaggaatgtcgc
ttcaagaagtgcatcgctgtggggatggccacagacttggtgttggacgacagcaagcgt
ctggccaagcggaagctgatcgaggagaaccgggagcgccgtcggcgggaggagctgcag
aagacggcgtgggaccggctggagcccacgcaggaggagtgggacctcatccgtatggtg
actgatgcccacatggccaccaacgcccagggcaaccactggaaacagaagcggaagttc
ctgagtgcagcgggggtgaaggaagcaaagcctgaggatattggtcatgcgtcgatggca
aacacacctgaaggaaacaaagtggacatagaggccttcagtcagtttacaaaaattatc
acccctgccataacccgagtggtggactttgccaaaaaactgcctatgttctgtgagctg
ccttgtgaagaccagatcattctgttgaaaggctgctgcatggagatcatgtcgctgcga
gccgccgttcgctacgaccccgagagcgagacgctcacgctgaacggggagatggcggtc
acgcgaggtcaactcaagaacggaggcctgggcgtcgtctcggacgccatctttgacctc
ggcgtctcgctgtcctcctttaacttggacgactcggaggtggctctgctacaggccgtc
atcctgctttcatctgatcgaccaggcctcagcagtgtggagcaaattgaacgctgccaa
gaggagttcctgctggcctttgaacattacatcaactaccgcaaacacaaagtggctcat
ttctggcccaagctgctaatgaaggtgacggacctgcggatgatcggcgcctgccacgcc
agccgattccttcacatgaaagtggagtgtcccaccgagctgttccctccgctcttcctg
gaggtcttcgaggactga
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