Solea senegalensis (Senegalese sole): 122786563
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Entry
122786563 CDS
T07721
Symbol
col28a1a
Name
(RefSeq) collagen, type XXVIII, alpha 1a isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssen01002
]
122786563 (col28a1a)
Peptidases and inhibitors [BR:
ssen01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
122786563 (col28a1a)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
PqqF-like_C_4
Motif
Other DBs
NCBI-GeneID:
122786563
NCBI-ProteinID:
XP_043908882
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All DBs
Position
LG20:14424348..14445418
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AA seq
1180 aa
AA seq
DB search
MTMLRSQFGLKVLIVILTLTNSTTCQSRKKKGQREDNYVIKSEAKTLICPVEIMFIVDSS
EKAKAQLFERQKVFLLRFSTKLAQLHSAGWRLRLRLAALQYSSTVSVEHNFRDWQDVDVF
QSRVAAMSFIGHGTYSAYAITNATQVFSRETSPSSLRVALLMTDGTDHPRSPSAVRAAAE
AKRHSITLFVIRLSSPTKDGPMSTKLRSIASAPPQQHVLGLTDSQLDERLFSELNTIVKT
RCPHPKSFLCEKGERGYPGYPGTPGEQGSGGALGPKGSHGEPGMNGRPGLEGLEGKPGSK
GEKGEQGECGASGKKGEKGTDGLPGPGGTRGEKGAMGTPGEQGPEGPSGSKGERGPRGAP
GPPGDAGVGFPGPKGDRGTQGRPGPPGPIGVGEPGMTGSSGPPGIQGSPGFPGEGLPGPK
GDRGYEGPKGGRGLPGLGYKGDKGNTGAPGLPGLVGFPGPSNQGEKGDQGPAGPSGPRGP
PGLGIVGPKGDQGFPGDPGPPGEWGLGDTGSKGEPGPNGTAGIPGIPGEDGLPGPKGETG
LQGLRGLEGTPGNGIPGEKGDRGDRGPRGLPGPPGLIGPAGAKGEPGSRGMMGQPGPAGQ
GLPGSKGDPGTVGPYGPMGEPGIGIIGSKGNKGNSGPVGQPGIKGEGIPGPPGLPGLPGV
QGDTGPEGKGLPGSKGDRGLRGLPGPPGPPGIGLYGPKGSIGQPGPPGLLGLPGEGIQGP
KGESGFRGPMGPRGLPGDGLPGEKGDRGIPGGQGKKGDKGVYGEPGSTGPKGRPGGKGEP
GLTREEVIRIIREICGCGLKCREAPLELVFVIDSSESVGPDNFELVKDFVNALIDQLSVS
GETTRIGVVLYSQVNMVVVSLQQTLSQDEITAAIQTMPYLGEGTLTGSAIHQASELFQAS
RPGVRKVALVLTNGQADPQDLRHFQETALDAHAQGVEMIVVGVINKTDLLYDDFQQEINV
IASEPAEEHIYLVDDFRTLPTLEGTILSQICGQGDTTNFLPNSVYRAVETHPDVPGDSGS
KEFPEEEDTHHELTMDAITSPTLQSPESRWPEEDLVDTTLLLEPWSRRSNITLRSNGAGE
KQGVVTISTVGPQNPSDWLHEAKSAQAPVSPPPPPPPTDSPVPAEGCSQPLDPGSCREYI
VRWYYDPEANTCAQFWYGSCEGNENNFESEANCRDSCIYT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctgcggtcacagtttggactaaaggtgctcattgtcattttgacgctgaca
aactcaaccacgtgccaaagcagaaagaagaaaggacagagagaggacaactatgtcatc
aagagtgaagccaaaaccctgatctgcccagtggagatcatgttcatcgtggacagttcg
gagaaggccaaagctcagctgtttgagcgacagaaggtgttcctcctacgatttagcacc
aagctggcacagctccactccgctggctggcgtctgcgtcttcgcctggctgctctgcag
tacagcagcaccgtttcagtggagcacaacttcagagactggcaggacgtggatgtgttc
cagagccgcgtggcagccatgagcttcatcggccacggtacctactccgcctatgccatc
accaacgccacccaggtgttcagccgcgagacatcccccagcagcctcagggtggcgctg
ttgatgacggacggaacggaccacccccgcagccccagtgctgtgagagctgccgccgag
gccaaacgacacagcatcacgttgtttgtcatcaggctgtccagcccgaccaaggacgga
cctatgagtacgaagctgcggtccatcgccagcgctccaccacagcagcacgtcctcggc
ctcactgacagtcagctggatgagcgactcttcagtgaactgaacaccatagtgaaaact
aggtgtccacacccaaagtccttcctgtgcgaaaagggggagaggggttaccctggatat
ccagggacaccaggggaacaagggtctggtggagcgcttggtccaaagggatctcatggg
gaacccggtatgaatggacgtccaggactggagggccttgagggtaaacctggcagcaaa
ggggaaaagggagaacagggtgaatgtggtgcctctggaaaaaaaggagaaaagggaact
gacggactccctggccctggaggcaccagaggagagaagggagccatgggaacacctgga
gagcaaggtccagaggggccatcaggctctaaaggagagcgaggaccaaggggtgcacct
ggacctccaggggatgcaggagttgggttccctggtcccaagggcgacagaggaacccag
gggagaccaggaccacctggacccatcggtgtgggtgaaccagggatgacaggttcatcg
gggccaccagggatacaaggatctccagggtttcctggtgagggtctgccaggacccaag
ggtgacaggggctatgaggggcctaagggcggccgcggacttccagggttggggtacaaa
ggtgataaggggaacacaggagctcctgggctgccaggtttggttgggtttccagggcca
agcaaccaaggagaaaagggggaccaagggcctgctgggccctctggacctaggggacct
cctggattgggtatagttggaccaaagggtgaccagggtttccctggagaccctggaccg
ccgggagagtggggtcttggtgacacaggatcaaagggagagccaggaccgaatgggacc
gctgggatacctggtattcctggtgaggatggacttcccgggcccaagggagagacaggg
ttgcaaggtctgcgaggcctcgagggaacacctgggaatggtattcctggagaaaaggga
gatagaggtgatcgtgggccaagaggacttccagggcctcctggcctgattggccctgct
ggagctaagggggaacctgggagccgaggaatgatgggccaacctggacctgctgggcaa
ggccttcctggatcaaagggggatcctgggactgtgggaccatatggacccatgggagaa
cctggaattggaattattgggtcaaagggtaataaaggaaattctgggcctgtgggacaa
ccagggataaagggagagggcatcccaggaccaccaggtcttcctggcttaccaggagtg
caaggagatacaggccctgaagggaaaggcttacctggatctaagggtgaccgggggcta
cgggggctcccaggcccaccaggtcctcctggaattggactttatggacctaagggttct
ataggacagccaggtcccccaggcctccttggacttccaggagagggcatccagggacca
aagggtgagtctgggtttcgagggccaatgggccctcgggggttgccaggagacggcctc
ccaggggagaagggtgacagaggcatccctggaggccagggaaagaaaggagacaaggga
gtttatggagaacctggttctactggaccaaagggcagacctggagggaagggtgaacca
gggctgacaagagaggaggtcatcagaataataagagaaatctgtggctgtggtctgaag
tgcagagaggcacctctggagctggtgtttgtcatagatagctctgagagtgtgggacca
gacaactttgagctggtgaaggactttgtcaatgctcttattgaccagctgtcggtaagc
ggagagactacccgaataggtgtggtcctctacagccaggtaaacatggtggtggtgagt
ctgcagcaaacgttaagccaagatgaaatcacggctgccattcagacgatgccctacttg
ggtgaaggcaccctcaccggcagtgccatccatcaagctagtgagctgttccaagcctcg
cggcccggtgtgaggaaggtggccttggttttaacaaatgggcaggctgacccccaagac
ctcagacattttcaagagacagccttggatgcacatgctcagggggttgagatgattgtt
gtgggagtcattaacaagaccgaccttctgtatgatgacttccagcaagagatcaatgtt
attgcatctgaacctgctgaggagcatatctaccttgtagatgacttcaggacacttccc
actctggaaggcacaatactgagtcagatttgtgggcagggtgacacaacaaactttcta
ccaaactcggtctatcgagctgtggaaacccacccagatgttccaggggacagcggctcc
aaagagtttccagaggaggaagacacacaccatgaactcacaatggatgcaataacatct
ccgactctgcagtcccctgaatccaggtggcctgaagaggacctggttgataccacactg
ttgctggagccctggagcaggcgttcaaacatcacattgcgttcaaacggtgccggagag
aagcagggcgtagtgacgatctccacggtgggtccacagaatccatctgactggctgcat
gaggcaaagagcgcacaggctccggtgagccctccaccccctccacccccgacggactca
ccggtgccagctgaaggctgcagtcagcctctggacccaggttcctgtcgggagtacata
gtcaggtggtactacgaccctgaggccaacacctgtgctcagttctggtacggcagctgc
gagggtaacgaaaacaactttgagtctgaagccaactgcagggattcctgcatctacaca
tag
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