Solea senegalensis (Senegalese sole): 122786604
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Entry
122786604 CDS
T07721
Symbol
trps1
Name
(RefSeq) zinc finger transcription factor Trps1 isoform X1
KO
K22040
atypical GATA-binding protein TRPS1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122786604 (trps1)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122786604 (trps1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Znf_C2H2_Trps1_4th
zf-C2H2_Trps1_1st
zf-C2H2_Trps1_3rd
zf-C2H2_Trps1_2nd
zf-C2H2_Trps1_5th
GATA
Sina_ZnF
Actin_micro
Motif
Other DBs
NCBI-GeneID:
122786604
NCBI-ProteinID:
XP_043908955
LinkDB
All DBs
Position
LG20:complement(5079780..5182396)
Genome browser
AA seq
1543 aa
AA seq
DB search
MISREMVRKKNPPIRSVGGEEEEEEEGRRPAGEEEEEGEEEGRVGAEAERINRPSEPESS
DRVRGDEEPEEVEGGESECVSSSVSPSSVGDRYSNEERGGREGGGGGGGGGRTKQGDAAL
TDRPESQSEPEDGEKGLEERERSDRVTPPLLSAPHLLPTQEGGEEPTADTPPFSSSPSPK
LQDFKCNECGYGYYGNDPADLVKHFRKYHLGLHNRTRQDAALDTHILALHNMAPQHTPLD
TQTGQGQRNQAKEYGKTRPDVHNQQHRAVMMNGTYDVQVTVGGTLIGIGRKTSDCQGNTK
YFRCKFCNFTYMGSNSLELEQHFLSSHPNKVKTPPTTPLLATNNLAKHDNQATGRSPIID
GAERVAVRAEDNSLVGYSIPVRVSSDSSSWTGEPVRGSVQAYYWCKFCSWSCEWSGGSAK
LLEHYEQRHRMSTGGAMSPSNSNPGALDRERERGGRREDGERDHMVSKSRKDLSSNPSST
SQGDPNCSDPEAVVTSYNCQLCDFRYSMAHSADVIVVAPLLLHYQHNHSIHRCCIQHCIY
CPQGLCQPQKHLGEVSHPFACRKPTCPKCCSKFPQSTKQQDTVGSKPATTSPSMTPPAPR
GDPGVTHLCDQCAFATTDIDVLLQHYETCHTLINLRGAPPHVKAEEDVVADKEGGRGAGG
EREYSCTKCHFITEVEEEIFRHYRRVHACCRCRRCDFTAPDSSALLDHFNSVHCHDSSPS
LSSVTTTSLPTSLTTSLTPSLTLSANGCSAPSTLAIKEESKGDLRLLYSLAPPEGRLAEG
GREEAGGVVKSEGGEEKEREREKGWVLGEMRGMGERGGEQAHGLLWVPKERMGPERGIDR
GTGGGSPSIFPSPLPLSFVAANHEASQQKRGVASPSMVYLGDTKPFLGDTKSFLGDAKLY
GGGRSAGGGGAAGGGEKQSPMPTQQYTGSGGGGSGGQEGKGAAKEESQSLLRRRRGSGVF
CANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPLNIIKQNNGEQIIRRRTRKRLNP
DSLSSENPTSKQQRITSEERMNGEESDRSCASVKNQQPSPRSRSPRSTQAFLANQTLEIH
RRMPPLLLPSHTPSSLVAEGNGGIAEGGLTSKVDGGKGGGGSERGSPIEKYMRPSKPSSY
SPPGSPIEKYQYPLFSLPLPLTISPDLTPESDWLRFWTKYKMAATSGVPGSISNLSSPGG
LGNNAHYLGAMVTSVQHHQPSYTVPYCASPYSPLPPPPAPPHYPPPPLHPQTSSSSTSSS
SLENDAPLDLAMRQRDTGAANAHMSTNGAERRKLESPLAERLRANWKGEKKEEERTDEGG
NQREEIKKEEQDHLTTNRSVVSSNRTTAEVATQDDLTNRCIHCGIYFLDEVMYALHMSCH
GDQGPYQCSFCLHVCVDRYDFTTHIQRGLHRYTDKTVQQKGHAQDGKIQSSTAMSERESP
SVTPEGKTDRGDHDEVTCERGDVTGVGRDDREEEEEEEEAVTGSGANDNATGAEEEVRVE
THDTTNKELGGETPPDNGADTTKSAEVSTVAEGKDLEGNAERN
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcagagagatggtgaggaagaagaatccccctatccgcagtgtcggtggtgag
gaggaggaggaagaagaggggaggaggccagcaggagaagaagaagaggagggagaggaa
gaggggagagtaggagcggaggccgaacgaataaaccgaccctctgaaccagagtcctcc
gaccgggtcagaggagatgaggagcctgaggaggtggaggggggagaaagtgagtgcgtt
tcgtcatctgtctctccctcatcagtcggtgatcgctacagtaatgaggagagagggggg
agggagggaggaggaggaggaggaggaggggggaggacaaagcaaggagatgctgcgttg
actgacagacctgagagccagtcggagcctgaggatggggagaaggggttagaggagaga
gagaggagcgatagagtcacccctcctctcctctctgctccccacctcctccccacacag
gaaggaggggaggagccgacagccgacacccctccgttttcctccagcccctctccaaaa
ctccaggacttcaagtgcaacgagtgcggttatggttactatggcaacgaccctgctgac
ctggtgaagcactttaggaagtatcacctgggtctgcacaaccgcacacggcaggatgct
gccctcgacacacacatcctggccctccacaacatggccccccaacacacacctctagac
acacagacaggacaagggcagagaaaccaagccaaagagtatgggaagacgaggccagat
gtacacaatcaacagcatagggcggttatgatgaatggcacatatgacgtacaggtgact
gtgggtggcaccctaattgggattggccggaagacttctgattgccaggggaacactaag
tactttcgctgcaaattctgcaacttcacgtacatgggcagcaattctttagaacttgaa
cagcacttcctgtcttcacatccaaataaagtcaaaactccaccaaccacacccctgcta
gccacgaacaacctggcaaagcacgacaaccaggcaacggggaggagtccgatcatagac
ggggcggagcgagtggctgtgagagcggaagacaattccttggtcggctactccatccca
gttagggtgtcttcagactcatcaagctggacaggggagccggttcgaggctctgtacaa
gcttactattggtgtaaattctgtagctggagctgtgagtggtcggggggctcagcaaag
cttttggagcactatgaacaaagacacagaatgagcacgggaggagctatgagccccagc
aattctaatccgggggcgttggaccgggagagggaaagaggagggagaagagaagacggt
gaaagagatcacatggtatccaaaagccgcaaagatctatcatcaaacccttccagcacc
agccaaggagacccaaactgcagcgatccggaggcggtcgtgaccagttacaactgtcag
ttgtgcgattttcggtactcaatggcccacagtgcagacgtgattgtcgtagcgccgtta
ctactgcactatcagcacaaccactccatccatcgatgctgcatccagcactgcatctat
tgtccacaggggctctgtcaaccacagaaacacctgggagaggtctcccacccctttgct
tgtcggaaacccacctgccccaaatgctgttccaagtttcctcagtccaccaaacagcag
gacacagtcggttcgaaacctgccaccacctcacccagcatgacccctcctgctcccaga
ggtgacccaggagtcacccacttgtgtgatcagtgtgcgtttgccaccaccgacattgat
gtgttgctgcaacactatgaaacctgccacaccctcatcaacctgaggggggcaccccca
catgtcaaggccgaggaagatgttgtggctgacaaggaaggtgggagaggagcaggagga
gagagggagtactcttgtaccaagtgtcacttcatcacagaagtggaagaagagattttt
agacactacaggcgtgtccatgcatgctgccgttgtcggcgctgtgacttcacggctcct
gattcatcggccctcctcgaccattttaactctgtccactgtcacgactcctctccctca
ttaagctcagtgacaacaacctccttgcccacctctctgacaacttcactgacgccttct
ttaacactctcagccaatggctgctcagctccctctaccttagccattaaagaagagagc
aagggggatcttcgtctcctgtactccctggcaccgccggagggacggttggcagaaggc
ggcagagaagaggcaggaggggtggtaaaaagtgagggaggtgaggagaaagaaagagag
cgggagaaaggctgggtccttggggagatgagaggaatgggtgagagaggaggtgagcag
gcccatggtttactctgggtgcccaaggagcgaatgggcccagaaagaggaatagacaga
ggaacaggaggtgggagcccctctattttcccctcccctctcccattgtcttttgttgca
gccaatcatgaggcctcacagcagaagagaggcgtggcttcaccgagcatggtttacctg
ggagacaccaagccatttttgggagataccaagtcgtttttgggagatgccaaactgtat
ggaggaggaaggtctgcaggaggaggaggtgctgcaggtggaggggagaagcagagccca
atgcccactcagcaatatacaggaagtggaggaggaggtagtggaggacaggaggggaaa
ggagctgctaaagaggagtcacaatctctactaaggcggcgcaggggaagcggtgtcttc
tgtgcaaactgcttgaccaccaagacatcgctgtggaggaagaacgctaacggaggctac
gtctgcaacgcgtgtggtttataccaaaaattacattcgacacccagacctctaaacatc
atcaagcagaacaacggcgaacaaattattcgacggcgaacgcgaaagcgcctcaacccc
gactctttgtcgtctgaaaaccccacctccaagcagcaacgaatcaccagcgaggagcgc
atgaacggggaggagtcggaccgaagctgtgcgtcggtgaaaaaccagcagccttcgcct
cgctcgcgctcaccccgatccacgcaggccttcctggccaatcagacgctggagatccac
aggcgcatgccgcctctgctcctcccttcacacactccctcctcactggtagccgagggc
aacgggggcatcgcagagggaggccttacgtcgaaagtggatgggggtaaaggcggaggg
ggatcggagaggggaagtccaattgaaaaatatatgcgtccatccaaaccgtccagttat
tcacctcctggttcacccattgaaaagtatcagtatccccttttctctttacccttacca
ttaaccatctcacctgatttgaccccagagtcggactggctcagattctggaccaagtac
aagatggcagccacctctggggttcctggtagtatcagtaatctcagcagccccggtggc
ctcggaaataacgcacattatcttggtgcaatggtgacttcagtacaacatcatcagcca
agctacacggtgccttactgcgcctctccctattctcctcttccgcctcctccagctcct
ccccactatccccctccccctcttcatccacaaacctcatcatcatcaacctcatcgtca
tcactagaaaacgatgctcctttggatcttgcaatgagacagagagataccggtgctgca
aatgcccacatgtcaacaaacggtgctgaacggaggaagctggagtctccacttgctgag
aggttgcgagcgaactggaaaggagagaaaaaggaggaggagaggactgacgagggaggg
aaccagagagaggagatcaaaaaggaagaacaggatcacttgacaacaaaccggtcggtc
gtttcatcgaatcgtacaacggcggaagtggccacacaggacgatctgaccaatcgctgc
atccactgtgggatctactttctcgacgaggtcatgtacgccctgcacatgagttgtcac
ggtgaccagggaccataccagtgcagcttttgcctccatgtgtgtgtggaccgctatgac
ttcaccacacacatacagaggggcttacacaggtacacggacaagacggtgcagcagaag
ggtcacgcgcaagatggaaaaattcagagtagcacagcgatgtcggagcgggagtctcca
agcgtcactccagagggaaaaacagacagaggtgaccatgatgaggtcacatgtgaacgt
ggtgatgtcacaggagtgggtcgtgatgatcgggaagaggaggaagaggaagaagaagca
gtgacaggcagtggtgccaatgataatgcaacaggagctgaagaagaggttagagtcgag
actcatgacacaacaaacaaggaattaggaggcgaaacgccgccggacaacggcgccgac
accacgaaaagcgcagaggtctcgactgttgctgagggtaaagacttagaagggaacgca
gagcgtaattaa
DBGET
integrated database retrieval system
