Solea senegalensis (Senegalese sole): 122786605
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Entry
122786605 CDS
T07721
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122786605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122786605
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122786605
03012 Translation factors [BR:
ssen03012
]
122786605
04131 Membrane trafficking [BR:
ssen04131
]
122786605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122786605
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122786605
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122786605
Translation factors [BR:
ssen03012
]
Eukaryotic type
Elongation factors
122786605
Membrane trafficking [BR:
ssen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122786605
Exosome [BR:
ssen04147
]
Exosomal proteins
Proteins found in most exosomes
122786605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
122786605
NCBI-ProteinID:
XP_043908961
LinkDB
All DBs
Position
LG20:12680362..12686162
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AA seq
461 aa
AA seq
DB search
MAKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVM
DKLKAERERGITIDIALWKFETTKFLVTVIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSEARFTEVKKEVTSFLKK
TGYNPASIAFVPISGFHGDNMMEASDKMKWYKEWSIERKEGKASGATLFQALDSILPPDR
PIKKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFSPPNLTTEVKSVEMHHESLS
EALPGDNVGFNIKNVSIKEIRRGNVAGDSKNDPPMAAETFTAQVIVLNHPGQINKGYSPV
VDCHTAHIACKFAELLQKIDRRSGKALEENPKSVKSGDAAMVLMEPSKPLCVEAFAEFPP
LGRFAVRDMKQTVAVGVIKSVNKKNPTSGKVTKAAVKAAKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggagaagctccacatcaacatcgtggtcattggccatgtcgactctggcaaa
tccaccaccaccggccacctgatctacaagtgtggaggaatcgacaagagaaccatcgag
aagtttgagaaggaagccgccgagatgggcaagggctccttcaagtacgcctgggtgatg
gacaagctgaaggccgagcgtgagcgtggtatcaccattgacatcgctctgtggaagttt
gagaccaccaagttcctagtgactgtcattgatgctcctggacacagggatttcatcaag
aacatgatcactggaacatctcaggctgactgcgccgtgctgattgttgctgccggtgtt
ggtgagttcgaggctggtatctccaagaatggccagacccgtgagcacgccctgctggcc
tacaccctcggcgtgaagcagctcattgtcggagtcaacaagatggactccacagagccc
ccttacagcgaagctcggtttacggaagttaaaaaagaagtgacctcgttcctcaagaag
actggctacaaccctgcctctattgcctttgtgcccatctctgggttccacggagacaac
atgatggaggccagcgacaagatgaagtggtacaaggaatggagtattgagcgcaaggaa
ggtaaggccagtggagccacattgttccaagctctggactccatcctgccacctgatcgc
cccatcaagaagcccctacgtttgcccctgcaggacgtctacaaaattggtggtattgga
acggttcctgttggacgtgttgagactggtatcctgaagcctggtatggtcgtcacgttc
agtccccccaatctgaccactgaggtgaagtccgtggagatgcaccacgagagcctgtct
gaggctctccccggtgacaacgtcggttttaacatcaagaacgtgtccatcaaggagatc
cgtcgagggaatgtggccggcgacagcaagaacgacccaccaatggctgcggagaccttc
actgctcaggtcatcgtgctgaaccatcccggtcaaatcaacaagggttatagccctgtg
gtggattgccacactgctcatattgcctgcaaattcgcagaactccttcagaagatcgac
cgtcgtagtggtaaagccctggaagaaaaccccaaaagtgtcaagtctggagatgcagcc
atggtcttgatggagccttcaaaacccctgtgtgttgaggcgtttgcagagtttccccca
cttggtcgcttcgctgtgcgtgacatgaagcagacggtggctgtcggtgtcatcaagtcc
gtcaacaagaagaatcccacatctggaaaagttaccaaggctgcagttaaagctgcgaag
aaatga
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