Solea senegalensis (Senegalese sole): 122786606
Help
Entry
122786606 CDS
T07721
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122786606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122786606
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122786606
03012 Translation factors [BR:
ssen03012
]
122786606
04131 Membrane trafficking [BR:
ssen04131
]
122786606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122786606
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122786606
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122786606
Translation factors [BR:
ssen03012
]
Eukaryotic type
Elongation factors
122786606
Membrane trafficking [BR:
ssen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122786606
Exosome [BR:
ssen04147
]
Exosomal proteins
Proteins found in most exosomes
122786606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
122786606
NCBI-ProteinID:
XP_043908963
LinkDB
All DBs
Position
LG20:complement(12687877..12697986)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIEKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFDEISKEVSTYIKK
IGYNPVTVAFVPISGWHGDNMLEASSKMSWFKGWNVDRKEGKANGTTLLEALDAILPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGTIVTFAPPELTTEVKSVEMHHESLA
EAVPGDNVGFNIKNVSVKEIKRGFVAGDSKNDPPKGADNFTAQVIVLNHPGQIQPGYSPV
LDCHTAHVACKFREFLQKIDRRSGKVLEESPKILKSGDAAIINLSPNKPMCVESFAEYPP
LGRFAVRDMRQTVAVGVIKKVEKKSAATAKVTKAAVKAQKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagatccacatcaacatcgtggtcattggccatgtcgactccggcaaa
tccacgaccaccggccacctgatctacaagtgcggaggaatcgaaaagagaaccatcgag
aagtttgagaaggaagccgctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggctgagcgtgagcgtggtatcaccattgacatcgctctgtggaagttt
gagacaagcaagtactatgtgaccatcattgatgctcctggacacagggatttcatcaag
aacatgatcactggaacatctcaggctgactgcgccgtgctgatcgttgctgccggtgtt
ggtgagttcgaggctggtatctccaagaacggccagacccgtgagcacgccctgctggcc
tacaccctcggcgtgaagcagctcattgtcggagtcaacaagatggactccaccgagccc
ccttacagccagaagcgctttgacgaaattagcaaggaagtgagcacttacatcaagaag
atcggttacaacccagtcactgttgcctttgtgcctatctctgggtggcatggagacaac
atgctagaggccagcagcaagatgagctggttcaaaggatggaatgttgaccgtaaagag
ggtaaagccaatggaaccaccctgctggaggctctggatgccatcctgcccccctcccgc
cccacaaacaaacccctgcgtttgcccctgcaggatgtttacaaaattgggggtattgga
actgttcctgtcggacgtgttgagaccggtatcctgaagcctggtacaatcgtgacgttt
gctccccctgaactcaccactgaggtgaagtctgtggagatgcaccacgagtctctggct
gaggctgtccccggagacaacgtcggcttcaacatcaagaacgtgtccgtcaaggagatc
aaacgtggctttgtggccggtgacagcaagaatgacccacccaagggtgctgacaacttc
actgctcaggtcattgtcctgaatcaccctggccagatacagccaggttacagccctgtg
ctggattgccacactgctcacgttgcttgcaaattcagggaattcctccagaagattgac
cgtcgttctgggaaggtccttgaggaaagccccaagatactcaagtctggagacgcagcc
attatcaacctgtctcctaataaacccatgtgtgttgagagcttcgccgaatatcctcca
cttgggcgctttgccgtgcgagacatgaggcagaccgtggccgtcggtgtcatcaagaaa
gtcgagaagaaatctgcagctacagcaaaggtcaccaaggctgcagttaaggctcagaag
aaatga
DBGET
integrated database retrieval system