KEGG   Solea senegalensis (Senegalese sole): 122786606
Entry
122786606         CDS       T07721                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122786606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssen03019]
    122786606
   03016 Transfer RNA biogenesis [BR:ssen03016]
    122786606
   03012 Translation factors [BR:ssen03012]
    122786606
   04131 Membrane trafficking [BR:ssen04131]
    122786606
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssen04147]
    122786606
Messenger RNA biogenesis [BR:ssen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     122786606
Transfer RNA biogenesis [BR:ssen03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    122786606
Translation factors [BR:ssen03012]
 Eukaryotic type
  Elongation factors
   122786606
Membrane trafficking [BR:ssen04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    122786606
Exosome [BR:ssen04147]
 Exosomal proteins
  Proteins found in most exosomes
   122786606
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 Gtr1_RagA GTP_EFTU_D4
Other DBs
NCBI-GeneID: 122786606
NCBI-ProteinID: XP_043908963
LinkDB
Position
LG20:complement(12687877..12697986)
AA seq 461 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIEKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFDEISKEVSTYIKK
IGYNPVTVAFVPISGWHGDNMLEASSKMSWFKGWNVDRKEGKANGTTLLEALDAILPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGTIVTFAPPELTTEVKSVEMHHESLA
EAVPGDNVGFNIKNVSVKEIKRGFVAGDSKNDPPKGADNFTAQVIVLNHPGQIQPGYSPV
LDCHTAHVACKFREFLQKIDRRSGKVLEESPKILKSGDAAIINLSPNKPMCVESFAEYPP
LGRFAVRDMRQTVAVGVIKKVEKKSAATAKVTKAAVKAQKK
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgggaaaggagaagatccacatcaacatcgtggtcattggccatgtcgactccggcaaa
tccacgaccaccggccacctgatctacaagtgcggaggaatcgaaaagagaaccatcgag
aagtttgagaaggaagccgctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggctgagcgtgagcgtggtatcaccattgacatcgctctgtggaagttt
gagacaagcaagtactatgtgaccatcattgatgctcctggacacagggatttcatcaag
aacatgatcactggaacatctcaggctgactgcgccgtgctgatcgttgctgccggtgtt
ggtgagttcgaggctggtatctccaagaacggccagacccgtgagcacgccctgctggcc
tacaccctcggcgtgaagcagctcattgtcggagtcaacaagatggactccaccgagccc
ccttacagccagaagcgctttgacgaaattagcaaggaagtgagcacttacatcaagaag
atcggttacaacccagtcactgttgcctttgtgcctatctctgggtggcatggagacaac
atgctagaggccagcagcaagatgagctggttcaaaggatggaatgttgaccgtaaagag
ggtaaagccaatggaaccaccctgctggaggctctggatgccatcctgcccccctcccgc
cccacaaacaaacccctgcgtttgcccctgcaggatgtttacaaaattgggggtattgga
actgttcctgtcggacgtgttgagaccggtatcctgaagcctggtacaatcgtgacgttt
gctccccctgaactcaccactgaggtgaagtctgtggagatgcaccacgagtctctggct
gaggctgtccccggagacaacgtcggcttcaacatcaagaacgtgtccgtcaaggagatc
aaacgtggctttgtggccggtgacagcaagaatgacccacccaagggtgctgacaacttc
actgctcaggtcattgtcctgaatcaccctggccagatacagccaggttacagccctgtg
ctggattgccacactgctcacgttgcttgcaaattcagggaattcctccagaagattgac
cgtcgttctgggaaggtccttgaggaaagccccaagatactcaagtctggagacgcagcc
attatcaacctgtctcctaataaacccatgtgtgttgagagcttcgccgaatatcctcca
cttgggcgctttgccgtgcgagacatgaggcagaccgtggccgtcggtgtcatcaagaaa
gtcgagaagaaatctgcagctacagcaaaggtcaccaaggctgcagttaaggctcagaag
aaatga

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