Solea senegalensis (Senegalese sole): 122786631
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Entry
122786631 CDS
T07721
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122786631 (trim71)
04121 Ubiquitin system [BR:
ssen04121
]
122786631 (trim71)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122786631 (trim71)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122786631 (trim71)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122786631 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
TEN_NHL
zf-RING_5
zf-C3HC4
zf-RING_2
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
122786631
NCBI-ProteinID:
XP_043909013
LinkDB
All DBs
Position
LG20:complement(16464264..16489987)
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AA seq
834 aa
AA seq
DB search
MLDMASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTTRRLHVLPCLHA
FCRQCLEGQRSPGDPLKLRCPTCDQKVSISEAGVDSLPSSNFLFSNLLDVVVSSDDQIQN
KNGHHHHRGGLGGGSTGFHHPHAGLLHPHHLGEPQCSSCDEENPATSHCLDCQEYLCDNC
VRAHQRVRLTKDHFIERLGESLHLGRVNSNSNQGQSGVSVSLAQSLQNNFALLSLFQDHM
SFCQHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAQQG
RQAVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALDERECELLWKVEKIRQVKAK
SLYLQVEKLHQSLTKLDSTIAAVSQVLDEGHHLDVLLARERMLTQIHELKVLRGLLQPQE
DDRFMFTPPDQALHIAIQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTVIGYDHDGE
PRLSGGDTLSAIIMSVGDGTLSAAEVADHQNGSYTISYIPKCEGEHLVSVLVCNQHIQGS
PFSVLVKSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFK
PCGAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKG
TKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVA
FNHEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSR
NHRVQVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgctggacatggcgtcattcccagactcggacctgcagacatgcccgctctgcaaggaa
ctgtgcggatcctcagctcccatctcctcgagctcctctacctcatcttcatcctcacat
acctcatcgtcctccagccagaccaccaggagactccacgtcctgccctgcctccacgcc
ttctgcaggcaatgcctggagggccagcgcagtcctggggacccactgaagctgcgatgc
cccacctgcgaccagaaggtgtccatctccgaggccggggtggactccctgccttcctcc
aacttcctcttcagcaacctgctggatgtggtggtgagctctgatgaccagatccagaac
aagaacggccaccaccaccaccggggaggcttaggtggaggctccacgggcttccatcat
cctcatgcaggcctcctgcatccccaccacctgggagagcctcagtgcagctcctgtgat
gaggagaacccggccacctcccattgccttgactgccaggagtatctgtgtgacaactgt
gtgcgggctcaccagcgggtgcggctgaccaaggaccacttcattgagcgcctgggcgag
agccttcacctgggccgggtcaactccaacagcaaccagggccagtccggggtgtcggtg
tccctcgcccagtccctgcagaacaactttgccctgctgtcactcttccaggaccacatg
agcttctgccagcaccatgacaatgaggtgttcctgttcttctgtgaaacctgctcggtg
cctatctgcagggagtgcagcgtgggccgtcacatgggacacacctttgtttacctgcag
gatgccgtgcaggactgcagagccatcaccattcagctgctggcagacgcgcagcaggga
agacaggctgtgcagctgagcatggagaaggtccaggccatggcagagcaagtggagatc
aaggctaaggtggtgcagactgaggtgaaggccctcgtcctgagacacaagaaagcgctg
gatgagagggagtgtgaactactgtggaaggtggagaagattcgtcaggtgaaggccaag
tctctgtacctgcaagtggagaagctgcaccagagtctgaccaagttagacagcaccatc
gccgccgtcagccaggtgctggacgagggccaccacctggacgtgctgctggccagggag
cgaatgctcacacagatccatgaactcaaggttctcagggggctgcttcagccgcaggag
gacgatcgcttcatgtttactcctccagaccaggcgctgcacatagccatccagtccatg
ggcctcatcagcagtggagcctttgcccccgtcaccaaagcccacggcgagggtctgaag
agtgcgctgcgtggcaagcccgcctcctttaccgtgattggctatgaccacgacggcgaa
ccacgtctgtccggcggcgacacgctgtctgctatcatcatgtctgtaggtgacggcaca
ctgtctgcggcagaggtggccgaccaccagaacggctcttacaccatcagctatatcccc
aaatgtgagggggagcacctcgtctcggtgctggtgtgtaaccagcacatccagggaagc
cccttcagtgtcctcgtgaagtccgggcggagctacggctctttgggttcccaagtgtcc
tcgtttgggtgcgagggggagggagacggtcagctctgtcgtccttggggcatcagtgtg
gacaaggagggttacgtggtggtggctgatcgcagcaacaaccgcatacagatattcaag
ccctgtggtgccttccaccacaagtttggctctctgggttctcggcccggacagtttgac
cggccagccggggtcgcatgtgacagtcagagacgaatcattgtggctgataaggacaat
caccgagtgcaggtgtttacttttgagggccagttcctgctcaagtttggggaaaagggc
accaagaacgggcagttcaactatccgtgggacgtggctgtcaactctgagggtaagatc
ctggtctcagacaccaggaaccaccgtgtgcagctgtttgcccccgacggctctttcctc
aataagtacggctttgagggcgcgctatggaaacactttgactctcccagaggagtggcc
tttaaccacgaggaccacctggtggtgaccgacttcaacaaccaccggctcctggtcatc
cggcccgactgccagtcggctcgcttcctgggctccgagggcaccgggaacggacagttc
ctgcggccccagggcgtcgccgtggaccaggagaaccgcatcatcgtggccgactcccgc
aaccaccgagtacaagtgtttgagcccaacggaaacttcttatgcaaatttggcacacag
gggagtggcttcggacagatggatcgcccctccggtgtggctgtgacgcccgacggcgtc
atcgttgtcgttgactttggaaataatcgcattctcaaattctaa
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