Solea senegalensis (Senegalese sole): 122786704 Help Entry 122786704         CDS       T07721                                  Symbol col5a2a Name (RefSeq) collagen, type V, alpha 2a   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism ssen  Solea senegalensis (Senegalese sole) Pathway ssen04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ssen00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     122786704 (col5a2a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ssen00536]     122786704 (col5a2a) Glycosaminoglycan binding proteins [BR:ssen00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122786704 (col5a2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  122786704 NCBI-ProteinID:  XP_043909119 LinkDB All DBs Position LG2:6074656..6109138 Genome browser AA seq 1498 aa AA seqDB search MMSFVHLRTFLFLVVSVAQVLIVTCQDATSGDDADCKADGQVYTNRDIWKPEPCRICVCD NGQVLCDEIQCDEVTNCEKIIIPDGECCPVCAATSTDGGGGGGGGGTFGGNRIYKGQKGE PGDVPLITGIVGRPGPMGPPGSPGDRGPRGNKGRPGLRGVAGYDGEPGVPGQPGEPGPPG HPTHPGGLGAHMASGFDGKSGPQGMLSGSRGESGTRGPPGPNGTPGQSGQQGPPGDVGEP GQMGPSGQRGPEGPPGKPGEDGESGKSGNPGEIGFPGSAGPRGFPGTPGPPGLKGHRGHG GPQGQKGEFGAVGSKGATGPPGPMGGPGPMGPAGMPGERGRPGPGGIAGKRGSPGNLGKP GPMGPLGLSGPAGYPGTPGMKGQPGPTGVRGPEGPQGQRGETGHQGRAGPVGLQGPMGTD GGPGAKGPVGNLGPQGQGGHIGPPGPPGPQGSTGQPGIKGQLGDVGVPGFKGEAGPKGES GPSGSQGVIGPQGEEGKRGPRGDSGSVGPAGPVGERGSPGNRGFPGADGLPGPKGAQGDR GTSGPPGPKGSLGDPGRTGEPGLPGARGLTGTPGVQGAEGKPGPLGAPGEDGRPGPAGSI GNRGPAGTMGVPGPKGFSGDPGKTGEQGSAGVSGQRGPPGKDGEVGPAGPPGPSGVAGDR GEQGPPGVNGFQGLPGNQGPPGEPGKPGDQGIPGELGAVGQIGPRGERGIPGERGDLGPN GLQGPKGIPGAPGPDGPKGSPGPTGALGDVGPPGLQGMPGERGISGPSGPKGDRGSIGEK GSEGTPGNDGARGAPGPVGPLGPAGPSGEKGEPGPKGPAGPPGSRGMPGARGEPGPIGAV GFSGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLSGAHGPPGPVGVAGLKGGRGTQGAP GPTGFPGSAGRVGPPGPTGPVGEPGPLGLPGKEGPRGLRGDHGPPGRQGEHGPPGPSGSP GDKGDSGEDGPTGPDGPPGPAGTTGQRGIVGLPGQRGERGMPGLPGPGGPPGKQGSPGSS GEKGPPGPVGSPGANGPRGDPGPDGPAGSDGPPGRDGVLGQRGDRGDSGPEGLIGPQGLP GPPGPVGAPGDAGRRGEAGSRGPVGPPGSAGKRGLVGPQGPRGDKGDLGDHGERGQKGHR GFTGLQGLPGPPGTTGEQGAPGIVGPSGARGPPGPIGPHGKEGYVGQPGPMGPPGTRGIS GEIGPEGPPGEPGPAGPPGPPGPPTAAMDDLFGPQDYDSGPPPPPEFSEDEALPNSNSSN SVVVDPSVQATLKALSSQIGSMKSPDGSKKYPARTCDDLKRCYPMKKSGEYWVDPNQGSA EDAIKVFCNMDTGETCISANPPNIPRKTWWSSSRNKPVWFGADINRGTQFAYGNKDQPAN SIAVQMTFIRLLSKEASQSITYHCKNSVGYKDEKTGNLKKAVILKGSNDLELKAEGNNRF RYTVVEDSCSQANGNWGKTVFEYRTQKTARLPILDIAPVDIGGPNQEFGIDLGPVCFL NT seq 4497 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcatttaaggactttcctttttctggtggtgtccgtggctcaggtt ttgattgtaacatgtcaagacgcgaccagtggagatgatgcggactgcaaggctgacggc caggtgtacacaaacagggacatctggaagccagagccatgccggatctgcgtttgtgac aacggtcaggtcctgtgcgatgaaatccagtgcgacgaggtgaccaactgtgagaagata atcatccccgacggcgagtgctgccctgtctgtgcggcgacatccaccgacggcggtggc ggtggcggcggcggaggcactttcggtggaaacaggatctataagggtcagaagggtgaa cctggcgatgtcccacttatcactggaattgtgggccgtcctggacctatgggacccccc ggctctccaggagatcgaggaccacgtggaaacaaaggaaggcctggcctgcgcggtgtt gcaggttacgatggagagcctggtgtgccaggtcagcctggtgaaccagggcctccagga catccaacacacccagggggtctcggagcccacatggcttcagggtttgacggcaaatcg ggaccacaaggcatgctgagcggctcaaggggtgagtcaggaacaagaggacctcctggc ccaaacggcacaccaggtcagtctggacaacaagggccccctggagatgttggagagcca ggacaaatgggtccatctggccagaggggacctgaaggtcctccagggaaaccaggtgaa gatggagagtcaggcaaatcaggaaatcctggagagattggattccctggatcagcgggt cctagaggattccctggtacccccggacctcctggactgaagggtcacagaggccacggt ggaccacaaggccaaaaaggtgaatttggagctgttggatctaagggtgccactggcccc cctggtccaatgggaggacctggacccatgggtcccgctggaatgccaggggagagagga cgtccaggacccggcggtattgcagggaaacgtgggtcacctggtaatcttggaaaacct ggtccaatgggtcctctgggtctcagtggcccagctggatatccaggaaccccaggaatg aagggacaacctggtcccactggagtcaggggtcccgagggcccacagggacagagagga gagaccggtcatcagggtagagctggaccagttggcttgcagggacccatgggcacagat ggtgggcctggtgccaagggaccagtgggtaatcttggtccacaaggtcaaggtggccat attggaccccctggcccgccaggacctcaaggaagcactggtcagcctggtattaaaggg caactgggagatgttggtgtaccaggatttaaaggagaagctggacccaaaggagaatct ggtccgtcagggtcccagggtgtgattggacctcagggcgaggaaggaaagcgagggcca cgtggagactctggctctgtcggtcctgctggtcctgttggtgagagaggatctcctggt aacagaggattccctggtgctgatgggcttccagggcctaagggtgctcaaggagatcgt ggaacatctggaccaccagggcccaaaggttctctaggagaccctggtcgtacaggagaa cctggtctaccaggtgcaaggggtcttactggtacccctggagtccagggggcagaaggc aagccaggaccactgggtgccccaggtgaggatggtcgtccaggtccagcagggtccatt ggaaacagaggtcctgcaggaactatgggagttccaggccccaagggcttcagcggtgac ccaggaaagacaggtgaacaaggatctgcaggcgtgtcaggtcaaaggggacctcctgga aaagatggtgaagtgggcccagctggtcccccaggaccatctggtgttgcaggagacaga ggagagcaaggacctccaggtgtaaatggattccagggtctgcctggaaatcaaggtccc ccaggagaacctggaaaaccaggcgatcaaggaattcctggagagcttggtgctgttggt caaattggaccgaggggggagcgtgggatacctggagagagaggcgatttaggcccaaat ggtctgcagggacctaaaggaattcctggtgcacctggtccagatggaccaaagggaagc cctggtcctacaggtgcactgggtgatgtgggtcctccaggtcttcagggaatgccagga gaaagaggcatctctgggccttctgggcctaaaggtgacagggggtcaattggtgagaaa ggatcagaaggtacaccaggaaatgatggagcaagaggggccccaggtcctgttggccca ctaggacctgctggacccagtggtgagaagggtgaacctggacccaaaggaccagctgga ccgccaggatccagaggaatgcctggagcaagaggtgaacctggtccaattggtgctgtt ggattttctggaccccctggtcctgatggtcaacctggagtcaagggagagcctggagag ccaggccagaaaggagatgctggatcacctggacctcaaggcttgtctggcgctcatgga cctcctggacctgtaggtgttgctgggctgaaaggcggaagaggaacacagggcgcaccg ggtcccactggtttccctggatctgcaggaagagtgggaccacccggcccaactggacca gttggagaacctggacctcttgggcttccaggaaaagagggacctcgcggtcttcgtgga gaccatggaccccctggaagacaaggagagcatggtccaccaggaccatcaggcagccca ggggacaaaggagactctggcgaagatggacccacgggtcccgatggtcctccaggtcca gctggaaccacaggacagagaggaattgtcggtcttcctggtcagagaggagagcgtgga atgccaggtcttccaggaccagggggtccaccaggaaaacagggttctccaggatcatct ggagagaaaggtcccccaggtccagttggttctcctggtgctaatggacctcgtggtgat cctggtcctgatggccctgcaggttctgatggccctccaggcagggacggtgttcttgga caaagaggagatagaggagattctggtccagagggattgattgggccacagggacttcca ggccctccaggtcctgttggtgcaccaggtgatgctggaaggcgaggagaggctggctca agaggaccagttggtccacctggctcggccggaaagagaggattagtgggaccccaagga ccaagaggagataagggtgaccttggtgatcatggagagaggggacagaagggacatcgt ggtttcacaggattgcagggtcttcctggacctccaggtacaactggtgagcaaggagct ccaggaattgttggaccaagtggtgccaggggacctcctggacctattgggcctcatgga aaggaaggatacgttggacagccggggcccatgggacctcccggaactcgtggtatcagt ggagaaattggaccagagggtcctccaggagagcctggtcctgcaggtcctcccggtccc ccaggacctcctacggctgccatggatgacctctttggccctcaggattatgactctggt cctcctcctcctcctgagtttagtgaggatgaggctctgcccaacagcaattcctccaac tcagtggttgttgaccccagcgtccaggccacgctgaaggctctcagcagccagattggc agcatgaagagtccagacggcagcaagaaatatcctgccaggacctgtgatgacctgaag cgatgctaccccatgaagaagagtggtgagtactgggtcgatccaaaccaaggcagtgct gaggacgccatcaaagtcttctgcaacatggacaccggggagacctgcatttccgccaac ccgcccaacatacctcgcaaaacgtggtggagctcctccaggaacaagcctgtgtggttc ggagcagatatcaacagaggaactcaatttgcttatggcaacaaagatcagcctgcgaac tccatcgccgtgcagatgaccttcatccgcctcttgtccaaggaggcatctcaaagcatc acataccactgcaagaactctgtgggctacaaggacgagaagacgggcaatttgaagaaa gctgtgatcctcaaaggctccaatgacctggagcttaaagcagagggaaacaaccgcttt agatacacagtggtggaagactcctgctcacaagcgaatggcaactggggcaagacagtg tttgagtacaggacacagaaaacagcaagacttccaattttggatattgctcctgttgac attggtggcccaaatcaagaattcggcatcgacctcgggcctgtgtgcttcttataa

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