Solea senegalensis (Senegalese sole): 122786803
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Entry
122786803 CDS
T07721
Name
(RefSeq) brevican core protein-like
KO
K06795
brevican
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssen00535
]
122786803
00536 Glycosaminoglycan binding proteins [BR:
ssen00536
]
122786803
04091 Lectins [BR:
ssen04091
]
122786803
Proteoglycans [BR:
ssen00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
122786803
Glycosaminoglycan binding proteins [BR:
ssen00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
122786803
Lectins [BR:
ssen04091
]
C-Type lectins
Lecticans
122786803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Sushi
EGF
Motif
Other DBs
NCBI-GeneID:
122786803
NCBI-ProteinID:
XP_043909234
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All DBs
Position
LG20:complement(6180275..6189098)
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AA seq
823 aa
AA seq
DB search
MVLVLQVSTREQQQQLKVGECVCLGACTIKLELLKSRVNLFVFSSERDLDAETVSFTTSS
DSSASGFTTHPSPPASASSVPVEPWTGIPHPTSSSDTQSTEKRAFSIVTTVAQLWESSIS
KQEGSTSLESEDSVTIDTEEEQLHVTKAEDTSFATTKSSERSNSSQLPTDSTTALYRTPG
SRGYWGTATIASEEASGLEPGTDTVTAVFGKDNKVAPTEEIKVFPTVEGEAKVSFSLEQG
VKVSPTPEEDIAITLTFEGEILPTLEEEAKGSFSLDEEVTLSPVYERELNVHPTTEEKTN
FSTAMKEETYIARTLDVKVTPVLKGTTVSPTSKEEYNITSTIEDDVVPILEKFDVGSTIE
EEANVVPTPEQLDVGLTSGEQANVSLHLEEEANFTTVLGEESKIASTSEENVNFAPTVEE
DFTIYPLDSQSSNWALVTTTTGPQESVNDLEYSRRTTSPSSTAASRSSTSTKPTRATTGT
TSTTITTTTHWSRRAWSPTTSTPRIFHKTTGPQRVTHHKPPVDQGLVDVEFSSTQPPTLL
ILPNERAAVGSTGKASDACVDNPCLNGGTCTDRDGQIKCLCLPTYGGTFCQTDMERCEPG
WDKFHGFCYRHFGQRLSWEVAEQHCRMLGAHLVSIMTPEEQSYINSNYKEYQWTGLNDKT
IEDDFRWSDGNPLLYENWYRGQPDSYFLSGEDCVVMVWHDDGRWSDVPCNYHLAYTCKKG
TSSCGPPPKVRNTSIFGKARQRYETNAVVRYHCAKGFQQRLSPLIRCLPGGMWERPQIMC
TPEAGGPTQQPEQTSATHNLAAIQDEFEAKETKKMPQYWDIKF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtccttcaagtgtccaccagagagcagcagcagcagctgaaagtaggtgag
tgtgtctgtctgggagcttgcaccatcaaactcgagctcctaaaatcacgtgtcaatctt
tttgttttttcctcagagagggatctcgatgctgaaaccgtcagtttcaccacctcgtcc
gattcatccgcctctgggtttaccactcatccatccccccctgcttcagctagcagcgtt
cctgttgaaccttggactggaatcccacacccgacgtcttcgtctgacacacaaagcact
gagaaacgtgccttcagcatcgtcaccacggtggcacagttatgggagtcttccatttct
aaacaggagggaagtacgagcttggaatcagaagactcagtcacaattgatactgaggaa
gaacaactgcatgtgaccaaggctgaagacaccagttttgccaccaccaagtcttcagag
aggtcaaacagttctcagctgcctactgattctaccacagcactgtatcgcacaccaggg
tccagagggtattggggtactgcgactattgcttctgaagaggcaagtggactggaacct
ggaacagatacagttactgcagtcttcggaaaagacaacaaagttgctccaactgaggaa
attaaagtttttccgactgttgaaggtgaggctaaagtttccttttcactggaacaggga
gttaaagtttctccaactcctgaagaagacatcgcaattactctaacctttgaaggggaa
attttaccaaccttggaagaagaggctaaaggctccttttcactggacgaggaagttaca
ctttccccagtgtatgaaagagaattaaatgttcacccaacaactgaagaaaaaacaaat
ttttccactgctatgaaagaagaaacgtacattgccagaacacttgatgttaaagtcacc
ccagttcttaaagggacaactgtttccccaacttcaaaagaagaatataatattacttca
accattgaagatgatgttgtcccaatccttgaaaagtttgatgttggatcaaccattgaa
gaagaagcaaatgttgtcccaacccctgaacaacttgatgttggtctaacgtctggagaa
caagctaatgtttccctacacttagaagaggaagctaattttaccacagtccttggagaa
gaatctaaaattgcttcaacctcagaggaaaatgtcaactttgctcctacagttgaggag
gatttcaccatctatcctctcgattcacaaagttctaactgggctctggtgaccaccaca
actggaccccaagaatctgtcaatgatctcgagtacagcagaagaaccacttccccctcc
tcaacagcagcttcacgttcctccacaagtacaaagcccaccagagctacaacaggaacg
acgagcaccaccatcacaaccaccacacattggtccagacgcgcctggagcccgaccaca
tcgacgcccagaattttccacaagacaacagggcctcagagggtgacacaccacaaacca
ccagtggatcagggtctggtggatgtggagtttagttccacccagccacccaccctgctt
atcttgcccaatgagagggcagctgtaggcagtacagggaaagcttcagacgcttgtgtg
gacaacccttgtctcaatggaggcacctgcacagaccgagacgggcagattaaatgtctc
tgtttgccgacatatggaggcaccttctgtcagactgacatggagcgatgtgaaccaggc
tgggacaagttccacggtttctgttaccgacacttcggccagcgtctgagctgggaggtg
gcagagcagcactgtcgcatgctgggagctcacttggtgtccatcatgaccccagaggaa
cagagctacattaacagtaactataaagaataccagtggactggtctgaacgataagaca
attgaggatgatttccgctggtctgatgggaacccactgctctatgagaactggtacaga
ggacagccagacagctacttcctctctggagaagactgtgtggtgatggtgtggcacgat
gacggacgctggagtgacgtgccctgtaactatcatctggcctacacctgcaagaaaggc
acctcctcatgtggtccaccaccaaaggtccgaaacacctccatatttggaaaagctcga
cagcgatatgaaaccaatgcagttgtacgttatcactgtgccaaaggtttccagcagaga
ctgagtcctctgatcaggtgtttgcctggaggcatgtgggagaggccgcaaattatgtgc
acccctgaggctggaggtccaacccagcagcccgagcagacgtcagcaacccacaacctt
gcagcgattcaagatgagtttgaggctaaggaaactaagaagatgccacagtactgggac
atcaagttttaa
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