Solea senegalensis (Senegalese sole): 122786808
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Entry
122786808 CDS
T07721
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122786808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122786808
03021 Transcription machinery [BR:
ssen03021
]
122786808
03036 Chromosome and associated proteins [BR:
ssen03036
]
122786808
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
ARID
122786808
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122786808
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122786808
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
122786808
NCBI-ProteinID:
XP_043909240
LinkDB
All DBs
Position
LG20:complement(1652313..1724292)
Genome browser
AA seq
2278 aa
AA seq
DB search
MAAQVASVASLNTNPPSELKKPDRDTHEESVPGVKEHENKEPGPDRSPGQRELQDGSDCG
NAGGGGDSDMKNGNGNLPRANNSGNQNDTGGPEGNSHPGIGHHHSGPFPPPPYGYNQHYS
RAPFHQHGGQQSAGMAAASGTGMMDPYPLNSHEHGYPNHYNNYGPFQNRTYQSQGYGAMN
SPRNNQPPAAGGQPVKQQPAGGTTAMAASFNNQRYNMVNQQSTSTPTLNQLLTSPSSTRS
YPNYPQGDYNNQEGVNKGPGDMGNSQYGGVHPGWQQRTHHPPPMSPGNTGQPLNRTQPPG
SMDPVGKMRGQPYGGPNSYSLQQGPPTGTGPQQGGSYTSPGYGPAGPQRYPMGLQSRTPA
SMGGIQYGQQMSTYGQQGPGGYSQQSQGYYGQHNPPPHPGQQQPPYPGQPQASSGPPYPH
QGHPSQPPGQHGQPGPPYQQSQGPHGPAPGQPTYGQPSQAQPAQPSYTPPQQPQPHSHSH
SHSHSHSQPQSQPQPQPQSQPQSQSQTSQSQSQSQPQPQPQPQPQSQTQQQCPGSQTQQG
PQGQPGYPHPAGPGQPLQQQGPPQQPHTGGPLPQTQQPPGHSQPSPYSQTLQQQQQQQQS
SYQRFPPPPQELSQDSFSSQSSAPPSNQPMTSSKSSQEDGLQARPSSLPDLSGSIDDLPT
GTEGALSPGVSTSGVSSSQGDQSNPAQSPFSPHTSPHIPGMRGPSPSPVGSPGSVTPSRS
GPLSPVAVPGNQIPSRPPSAHSDSIMHSSISQDRVYVRNPQMPPYGSPSHPGSALSPRQS
AGGQMHAGMGPYPQNTSIGNYGPQGGQYGPQGYPRQPGFTGMPNANYPSGPNMGGTMNPM
PGQGNGASYGNMPPSRVGQGQMGARPYGPGVGSNVGSMPPHVGSGMCPPPGLNRKDGGSS
MHHGSTNSIHNRPPGYQNMSQGIMGPGSPYGSGMNSVHSMMNQGGTGMYPVGANMANNTA
EFGIDKINPAQKMNNKLDVIPKPETKKKSSSSTITNEKITRLYELGPEPERKMWVDRYLA
FAEEKTMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAA
SSLKKQYIQCLYAFECKVERGEDPPPDFFNTDTKKNQTKVQPPSPAGSGSLQGPQTPQST
SSSMAEGGDLKPPTPASTPHSQMPPLPGIRSSVSLQDPFADSGDPAFSRRNAMTPNIQGY
QPGMGGPEMMGRMGPYEANKDPFGGIRKAGEPFMSQGPNSGTGELYSRGPPGLLGNMQMG
QRQQYPYGYDRGQETDMSTDSSMGPGAPQPSGADTAMYSPSRPSPQHRHESYINQYPGQG
APPGGPYSNQQQGMYPQQNYKRPVDGAYGPPPKRHEGEVYSVPYSGQQQAGTHSSGPQGQ
QNMYNQYNAYPGGDRRPPGLQNQFPFPFGRDRGPSSAGPNSQSPLPPQMMASSMPSGPEG
AQGSMWQGRNEISYPNYNRQGPPVPSQGSSYHCMNRSEELMPSDQRINHEGQWPGPVNQR
QPPFGPNGAGPPMTRPLPSTYQTSQNHITQVSSPAPMPRPMESTTSPSKSPYMHPGNKVP
KAGPSVHASHIGQAPVQLPMIRRDVTFPPGSIEASQPHLKPRRRLAMKDIGTPEAWKVMM
SLKSGLLAESTWALDTINILLYDDSSISTFNLCQLPGFLELVVEYFRRCLIEIFGIVKEY
EVGDPGQLKLIDPDAVDDSDDEIPMQDGDDTDEESEDGEELEESKVSPDDPSLLIMKQEE
SFQKDKSFEYKKEEKDRKSSVKEPVTSTSGSFPNPNFSEKLKQASKFDKLPIKVIRKKNL
FLVKYSSNLRLRQSFDSGLIHWSIGGGDTTKHIQTHFESQMKLLNKCKQSATDSCKKIHV
LQEKIQLNEKDKLLQPSEPQTTPVEITTLLLPIGAPVTATIDDVLSARPGSVTEEVVRGG
AEEQKENGKYLFSINPALQNRRNIKILEDEPHSKDETPLSTLSDWQDSLAGRSVCISNIV
RSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEVDEGVSCEREEW
WWDCLEVLRENCLVTLANISGQLDLSLYPESICLPLLDGLLHWAVCPSAEALDPFPTLGP
HGSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKVAVCREMAV
VLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYHQSQSSLLQLQGAPPFEPTS
VDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFMIGQS
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgcctctctcaatacgaacccaccatccgaactcaag
aagccggatcgggacacacacgaggagtcggtgccgggagtgaaagaacatgaaaataag
gagccgggtccggacaggtctcctggtcagagagagctgcaggacgggagcgactgtgga
aatgcagggggaggaggggattctgacatgaagaacggaaatgggaatttaccccgggca
aataatagcggtaatcagaatgatacaggcgggcccgaagggaatagccatcccggaata
ggacaccaccactcgggcccctttcctccacctccctacggttacaaccagcactacagc
cgggctccttttcatcaacatggcggacaacaaagcgctggcatggcagctgcgtcgggg
acgggcatgatggacccgtacccccttaattcacacgaacacggctacccgaaccattac
aacaactacggcccgtttcagaacagaacttatcagagccaaggatacggggccatgaat
tccccgcgtaacaaccagcctccagcggctggggggcagccagtcaagcaacagccggca
ggcggaaccacagcgatggctgcctcgtttaataaccagaggtataacatggtcaaccaa
cagtctacgtcgacaccaactttaaatcagcttttgacatctcccagttccaccaggagc
tatcccaactacccacaaggagattataacaatcaggaaggggttaacaagggaccagga
gacatgggcaacagtcagtatggaggggtccatccgggttggcaacaaaggacccatcac
ccgcctccaatgagcccgggaaacaccgggcagccccttaacagaacccagcctccaggt
tcaatggacccggtggggaagatgcgcggccagccttatggaggacccaattcatactcg
ctacagcaggggcctcccactgggactggaccccagcagggaggctcttacacgagcccg
ggatacggacctgctgggcctcagcggtatcccatgggcctgcagagcagaacacctgct
tctatgggtggcatacagtatggacagcagatgtcaacatatggacagcagggtccaggt
ggttacagtcaacagagccagggctactatggtcaacacaaccccccacctcatcctggt
cagcaacagcctccttacccaggccaaccccaggccagctctggaccaccttacccacac
cagggccacccttcacagcctcctggacaacatggccagccaggacccccttaccaacaa
tcacaaggtccccacggccctgctccaggccaacccacctacggccaaccctcacaagct
cagccagcacagccatcttacacccctccacagcagccacagccacacagccacagccac
agccacagccacagccacagccagccacagtcacagccacagccacagccacagtcacag
ccacagtcacaatcacaaacatcacaatcacagtcacagtcacagccccagccccagccc
cagccacagccacagtcccagacacagcaacaatgtcctggttcccaaactcagcaaggc
cctcaggggcaacctggatacccacaccccgctggaccaggacagccactgcagcagcaa
ggacccccacaacaaccacacacaggaggtccgctacctcaaacccagcaacctccagga
cacagccaaccatcaccttattctcagacactgcagcagcagcagcagcaacaacagtca
tcttatcagaggttcccacctccaccacaggaactttcccaggattcctttagctcacag
tcctctgcgcctccttccaaccagcccatgacttccagcaagagcagtcaagaagacggc
ctgcaggctcggccctccagtctcccagatctctcaggctctatcgatgacctgcccacc
ggcacagagggggctctgagcccaggtgtcagcacttcaggggtgtccagtagtcagggc
gaccaaagcaacccggcacagtcaccgttctctccacacacgtctcctcacataccaggc
atgcgtgggccctcgccgtcaccagtgggctctcctgggagtgtcaccccgtctcgctcc
ggccctctgtctcctgttgctgtgccaggtaatcagatcccatcacggcctcccagtgca
cattcggacagcatcatgcactcttccatcagccaggacagggtgtacgtgcggaaccct
cagatgcctccgtacggatcgcccagtcaccctggttctgctttatctccacgtcagtct
gctggaggccagatgcatgctgggatgggaccctatccccaaaacacctccattggaaac
tatgggcctcaggggggccagtatggcccacaaggttatcccaggcagcctggtttcacc
gggatgcccaatgccaactaccccagtggacccaatatgggtggcaccatgaacccaatg
cctggtcagggcaatggggcttcttacgggaacatgccacctagtagagtaggccaaggc
cagatgggtgcacggccctatggccctggtgtgggctctaacgtgggcagcatgcctcct
catgtgggctctgggatgtgtccccctccaggtttgaacaggaaggatggcggctcctcc
atgcaccatggatctactaactccatacacaacaggccccctggttaccaaaacatgtct
cagggtattatgggacctggttctccatatggctctggtatgaatagcgtgcacagtatg
atgaaccagggagggacagggatgtacccagtgggagccaacatggccaacaacactgca
gagtttggaatagacaaaataaaccccgcccagaagatgaacaacaaactggacgtgatt
ccaaagcctgaaactaaaaagaagtcgagttcctccaccatcaccaacgagaagataact
cgtctgtacgagctcggcccagagccagagaggaagatgtgggtggaccgctatctggcc
ttcgctgaggagaagaccatgggtatgaacaaccttcccgctgtgggacgcaagcccctc
gacctcttcaggctctatgtgtctgtgaaagagattggtggcctcacccaggttaacaag
aataagaagtggagggagctggccaccaacctgaatgtaggcacatcaagcagtgcggcc
agttcactcaagaaacagtacattcagtgtttgtatgcgtttgagtgcaaggttgaacga
ggcgaggacccaccgccagatttcttcaacacagacaccaagaagaaccagactaaagtc
cagcctcccagcccagctggttctggatctttgcaagggccccaaactcctcagtccacc
agtagttcaatggcagaggggggagacctgaagccccccacgccagcatccacaccacat
tcacaaatgcctccactgcctggtatcaggagcagtgtgagtctgcaggatccttttgct
gacagtggagacccagcattttccaggaggaacgccatgactcccaacattcaaggctac
cagcctgggatgggtgggccggagatgatgggaaggatgggtccctatgaggccaacaag
gacccctttggtggcataaggaaagctggagagccgttcatgtcacaaggtcccaacagt
ggaactggagaactgtacagcagaggcccaccaggcctcttgggtaatatgcagatggga
cagaggcaacaatatccatatggatatgacagaggacaggagacagacatgagcactgac
agcagcatgggaccaggagctccgcagccttctggagccgacacagccatgtactcacca
agccgcccttcaccacagcacaggcatgaatcctatatcaatcagtaccctggccaagga
gctccccctggtggtccatactcaaatcagcagcaaggaatgtatccacaacagaattac
aagcgtcctgtagatggagcatatggaccacctcccaagcgccatgagggagaagtgtac
agtgtcccctacagtggtcagcagcaggcgggaacacactcctcaggaccccagggccaa
cagaatatgtataaccagtataatgcataccctggaggcgaccgcagaccaccaggccta
cagaaccagttccccttcccctttggtcgggatagaggaccatcttctgcaggccccaac
tcccagtcaccattgcctccccagatgatggcaagttccatgccttctggtcctgaaggt
gcccaaggttcaatgtggcagggccgcaatgaaatcagctaccctaactataaccgacaa
ggtcctcctgtgccaagccagggctccagttaccactgcatgaaccgctcagaggagttg
atgccatcagaccaacgcattaaccatgagggccagtggcctggccctgtaaaccaacgg
caaccaccatttggtcccaatggtgctggacctccaatgaccagacccctgccatccact
taccagacttcccagaaccacattactcaggtgtcaagtccagcacccatgccccgtccc
atggaaagcacaacgtcacccagcaagtctccctacatgcatccaggcaataaggtgccc
aaagctggaccttcagtgcatgcctctcacattggacaggcccctgtgcagctgccgatg
atcaggagagatgtcaccttccctccaggctctatcgaggcctcccaacctcaccttaag
ccacgaagacggctcgccatgaaggacattggcactcccgaggcttggaaagtgatgatg
tcacttaagtcaggcttactagctgaaagcacttgggctttggataccatcaacatcctg
ttgtatgatgatagcagcatttctacttttaacttatgccagttgcctggattcctggag
ctggtggttgagtactttagaagatgtctcattgagatctttggcatcgtaaaagagtat
gaagtcggggaccctggccagctcaaactcatagaccccgatgctgtggacgactctgat
gatgaaattcccatgcaagatggtgacgatacagacgaagagagcgaggatggtgaggag
ctagaggaatcaaaggtcagccctgacgacccctcactgctcatcatgaaacaagaggag
agcttccagaaagacaagtctttcgaatacaagaaagaggagaaggatagaaagtcttca
gttaaggaaccagttacctctacctcagggtccttcccgaaccccaacttctcagaaaag
ctcaaacaggcaagcaagtttgataaacttcccatcaaggtcattcggaagaagaatctc
ttcctggtgaagtactcgtctaatctcagactgcggcagagctttgacagtggcttgata
cactggagcattggtgggggagacactaccaaacatattcaaacccactttgagagtcag
atgaagcttcttaataagtgcaaacaatcagcaactgacagctgcaagaagatccatgtg
cttcaagagaaaatccagttgaatgagaaggataaacttctgcaaccttctgaacctcag
accactccagtagaaataaccactctgctacttcccattggggcaccagtcactgccacc
attgatgatgtactatctgcccgcccaggatctgtcacagaggaagtggttcgcggaggt
gcagaggaacagaaggaaaatggcaagtacctgttcagtatcaaccccgccctccagaac
cgccgcaatatcaagatcctagaggatgaacctcacagcaaggatgagacgcctctgagc
acgctgtcagactggcaggactcgttagctggacgcagcgtctgcatttccaacatagtc
cgcagcctctcctttgtcccaggtaacgacctggagatgtccaaacacccgggtctcctg
ttgctgttaggtcgcctggtgctgctccaccacagacaccctgaacgcaaacaagcgcca
gtcacctacgaaaaggaggaggaggtcgatgaaggtgtgagctgtgagagagaagagtgg
tggtgggactgcctcgaagtattaagggagaactgtttggtcactctggcaaatatttca
ggccagctggacctttcgctctacccagagagtatatgcctgccactgctggatggcctc
ctccactgggctgtctgcccctcagcagaggccttggaccccttccctacgttggggccc
catggctcactttcaccccagagactggttcttgagaccctcagcaagctcagcatccag
gacaacaatgttgatctcattcttgccacgccaccgttcagtcgcttggagaaactctat
ggctcattggtgcgcttggtcggtgagcgcaaagtggccgtctgtcgggaaatggcagta
gtcttgttggctaatcttgcccagggtgacagcctggcggcacgggctattgctgtgcag
aaaggcagtgtcgggaacctactgggttttcttgaggacagcctcgctgccacacagtat
caccaaagccagagctccctgctacagttgcaaggtgcacccccatttgagcccaccagt
gtggacatgatgaggcgggcggcgagggccctgcatgcactggcaaaggtcgaggaaaac
cactcagagttcacgttgtatgagtcgaggctgctggacatctcagtctctccactcatg
aactcactggtgtcccaggtgatctgtgacgtactatttatgatcggccagtcatga
DBGET
integrated database retrieval system
