Solea senegalensis (Senegalese sole): 122786821
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Entry
122786821 CDS
T07721
Name
(RefSeq) LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 2
KO
K09364
POU domain transcription factor, class 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122786821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122786821
03021 Transcription machinery [BR:
ssen03021
]
122786821
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122786821
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
122786821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
122786821
NCBI-ProteinID:
XP_043909253
LinkDB
All DBs
Position
LG20:complement(14789256..14804148)
Genome browser
AA seq
692 aa
AA seq
DB search
MFVCSADIRMSKAAEEEKPGADYPGDSSDSDRNSPDGQVQPMKTSPFSLSPTPAGSKVKH
EESSEMTHITVPPPAPPSQQQQQQQQQQQQQQQQQQHHHTQLMLAGSQLAGLAALLPAQQ
QLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAAQQQANQQQQNQSQSQQQQPIKQEQTVQA
PQLALSQPIQLTAQDIQQLLQLQQLVLMPGHALQSPAQFLLSQPAQAQQQQQGLLSTPNL
IQLPQQNPGGLLTTPPRLSLQAHVRECLMTQXLSGLTPGGHGGHLGEEPSDLEELEQFAR
TFKQRRIKLGFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDA
ETMAVDSMLPSPSSISSPLHGLEGLPGRRRKKRTSIETNVRVALERNFSTNQKPTSEEIL
LMAEQLNMEKEVIRVWFCNRRQKEKRINPSCSTTPPLPSQTSPIVTHKTSCYSPHMISSQ
GLSQVTTSLSTTAASSSPTASCPMTPVSSAAVGSTSSSVTPPPHSTASPAPASLGAHGLN
TGNTMMGVSTGMNQALIGSNPLATMQALAASSGQLSLSSLEAGAGHMLLGGHGGPAVAAS
LRPSLFLNRPTLLPMVTGSMATASTATMGLVSSSSGGLGGTRLSFSQSPPAGASVDLMSP
TSCPEESPCSSPASFCSFSEASPPPLGGAMAE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtgttccgcagatatcaggatgtctaaagcagcagaggaggagaagcctggg
gctgattatccaggggacagttcagactcggatagaaacagccctgatggccaggtccag
ccaatgaaaaccagcccctttagcctctctccaacaccggctggcagcaaggtaaaacat
gaggagagctctgagatgacccacatcactgttcctcctcctgctcctccctcccaacaa
caacaacaacaacaacaacagcagcagcagcagcagcaacaacagcagcaccatcataca
cagctaatgctggctggcagtcagctggcagggcttgccgctctcctcccagcccagcag
cagctgctcctccaacaggctcaggctcagctcctggcagccgctgttcagcagtccaat
gcggcccacgctgctcatgctgcgcatgctgccgcgcagcaacaagccaaccagcagcag
cagaaccagtcgcagtcacagcagcagcagccaatcaagcaggagcaaaccgtccaggcc
ccacagctggctctgtcgcagccaatccagctcacagcacaggacatccagcagctgttg
cagctccagcagctggttttgatgcctggccatgctctccagtctccggcccagttcctc
ctgtctcagcctgcacaggcacagcagcaacagcagggtttgctttcgacaccaaatctg
atccagctacctcagcaaaaccctggaggacttctgacaacaccacctcgcctgagtctc
caagcacacgtaagagaatgtttaatgacgcaataactctccggcttgacccccggaggc
catggaggtcacctgggggaagagcccagcgacctggaggagctggagcagtttgcccgc
accttcaaacagcgacgcatcaagctggggttcacacagggagatgtcggtgttgctatg
ggaaaactctacggcaacgatttcagccagaccaccatctcccgctttgaagcgctcaac
ctgagctttaagaacatgtgcaagctgaagcctctgctggagaagtggctgagtgacgca
gaaactatggcagtggacagcatgctgcccagtccctcctccatctcctcccctctacac
ggactggagggtttgcccggccgacgcaggaagaaacgcaccagcatcgagaccaacgtg
cgagtggccctggagcgcaacttcagcacgaaccagaagcctacctctgaagagatcctt
ctgatggcggagcagctcaacatggagaaggaggtgatccgcgtttggttctgcaaccgc
cggcagaaagagaaacgcatcaacccctcctgcagcaccacccctcctctgcccagccag
acttcacccattgtgacgcacaaaacctcctgctacagcccgcacatgatatcgagtcag
ggtctgtcccaggtcaccaccagcctcagcacaacagctgccagctcatcacccacagca
tcgtgccccatgacacctgtcagctcggctgcagtcggctccacctcttcttctgtgacc
ccgcctcctcatagcacagccagccccgcccctgccagcctcggggcccacgggctcaac
actgggaacacaatgatgggagtaagcacagggatgaaccaggctctcattggcagcaat
cccctggctacaatgcaagctctggcagccagcagcggtcagctgtccctctccagcctg
gaggcgggagcaggtcacatgcttctgggtggacatggcggtcctgctgtcgccgcctcc
ctccgcccttctctcttcctcaaccgccccactctcctccccatggtgaccggctccatg
gcaaccgcctccacggccaccatgggactggtcagcagcagcagcggtggtcttggcggc
accaggctctccttctcacagtctccgcccgccggtgccagcgttgacctcatgagcccg
acctcttgccccgaggagtctccgtgttcgagtcccgcctctttctgttccttcagcgaa
gcctcgccgccgccactgggcggagccatggccgagtga
DBGET
integrated database retrieval system
