Solea senegalensis (Senegalese sole): 122786864
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Entry
122786864 CDS
T07721
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122786864 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122786864 (ctdp1)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122786864 (ctdp1)
Protein phosphatases and associated proteins [BR:
ssen01009
]
HAD phosphatases
Fcp/Scp phosphatases
122786864 (ctdp1)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122786864 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
Biotin_lipoyl
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
122786864
NCBI-ProteinID:
XP_043909308
LinkDB
All DBs
Position
LG20:complement(19273298..19325457)
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AA seq
1012 aa
AA seq
DB search
MEKPPTDSGGGGDATAAAEGPAVQVADVYWPTGALPLRLLEWKVKPGSLINVDSVLALCA
PIPHEKGTEAARLPEKKVKSDRAGVVKELCCQLGQVIPPGGVIVRIEECSHPIVMKGLCA
QCGQDLTKELQSSNGKQQAPISTATVSMVHSVPELMVSSEQAEQLGREDQHRLQRDKKLV
LMVDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHV
FTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDR
EDVWKFAPNLITVKKYIYFQGTGDINAPPGSREAQATKKGKKGPSSRPAESTESAGTLSA
EEHNNGLRKRKDHNISQKDEPSIPQSSQVVPANDRTHPSEGVEDESGRSKDLVTAALPGA
GSREAPEGDRTNVKEDGSNRLQEAQDGTNSSAPSHESNNLDFDLSSDSDNDSITEKPASL
ESDSEGKSCQAKKSGQEGVEQEPIDGVESQMRGVKENSSDVAEPSGVLPPDPELENGCSD
RIEPETESQNSEQSGITTGEELLDQSMEDEMEEEEEEVDTDQDDHLIYLEEVLERIHAEY
YARYAGYLRKESSEVPDIRKIVPELKGKALEGTTIVFSGLYPTNYPMERTREFYHAKALG
AKISKNLVLASQDSSRTTHLVAARAGTEKVRQAQGCKHLHVVTPDWLWSCLERWERVQEQ
LYPLKEDYSKMQRSNSPAGFPENRGSLQKPVFQQAPILRRPPPLEPEIRTYDPVTGKLIR
KGPHVSRPPPYLQVPGSLLLHDHGEQSCLRGTSKSPQDGATHSSSQDDEQPGPSHRKRQP
SMSETMPLYTLCKEDLESMDKEVDDILGEESDNESDGQGKEKPVNEEVEDEEEEQPEQQQ
QEEQQQQQEQQQQQPGAGQIGDVLVPQAQSLEENLQTPSSQASAGVLRGQKRKIEEAEEE
EEEEDDEEEEEKEKNKQFADESSKDSIEEEEGSSSEADEMAAALEAELNDFM
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcctcctacagattctggcggcggaggagatgcgacggcggcagcggagggc
cccgcggtgcaggtggcagatgtctactggcccacaggggctctcccgcttcggcttctg
gagtggaaggtcaagcctgggtctctcattaacgtggactccgtgctcgcgttatgcgct
cccattccccacgagaaggggacggaagctgccaggctgccggagaagaaggtaaaatcg
gaccgcgctggagttgtaaaagagctatgctgtcaacttggacaagtcatacctcccggg
ggtgtcatcgtcagaatcgaagaatgcagtcacccgatagtgatgaagggtttgtgtgcc
caatgtggccaggacctgactaaggagctgcagagctcgaatgggaaacagcaagctccc
atctccacagcaacagtctccatggtgcacagtgttccagagctgatggtcagctcagag
caagcagaacagctgggccgggaagaccagcacagactgcaacgggacaaaaagctggtc
ctgatggtggatctggaccagaccctgatccacaccactgaacagcactgccagcgtatg
tccaataagggcattttccacttccagctgggacgaggagagcccatgctccacacacgt
ctacgtccacactgcaaagagttcctggagaaaatagctaaactctatgagttgcatgtc
ttcacatttgggagccgcctttatgcacacaccatagctggctttcttgaccctgaaaag
aagcttttctcacatcggatcctttctagagatgaatgcatcgatcccttctccaagacg
gggaaccttaggaatcttttcccgtgtggggattcgatggtctgcataatcgatgaccga
gaagacgtgtggaagtttgcaccgaacctcatcactgtgaagaaatacatctacttccaa
ggaacgggagacatcaacgctccccctggatcccgggaagctcaggcgaccaagaaaggt
aagaaaggaccctcgtctcggccggcagagagcacagagtcagctgggacacttagtgca
gaagagcacaacaatggtctcaggaaaaggaaggaccataacatttctcaaaaggacgag
ccctcaatacctcagtcttctcaggtagttccagcaaacgataggacacatcccagtgag
ggtgtggaggacgaatcgggacggagcaaagacttggtcactgcagctctccctggggct
ggctcgagggaagctccggagggtgacagaacaaatgttaaagaagatggtagcaacagg
ttacaagaggcgcaggatggtacgaactcttcggcaccgagccatgaatccaacaacttg
gactttgacctttccagtgacagtgacaatgactccattacagaaaagcctgcttcatta
gagagtgacagtgaaggcaaatcttgccaagcaaagaagtctggacaagaaggtgttgaa
caagagcccatcgatggagtagagtctcagatgaggggcgttaaagagaacagttctgat
gtagcagaaccctcgggggttcttcccccagacccagagctggaaaatggctgctcagat
aggatagagccagaaacggagtcccagaatagtgaacaatctggcatcaccacaggtgag
gagctactggaccagagtatggaggatgagatggaggaggaagaagaggaagttgataca
gatcaggatgatcacctgatctacctagaggaagtgctggaaaggattcatgctgagtac
tacgctcgctacgcggggtacctgaggaaggagtcctctgaagtgccagacattcgcaag
attgtcccggagctgaaaggcaaagctctggagggcacaaccatagtgttcagtggtttg
taccccaccaactaccccatggagaggacccgtgagttctaccatgccaaggcactgggg
gccaagatcagcaagaatttggttctggcctcccaagattccagtcggacgacacatctg
gttgctgcaagagctggcaccgagaaggttcgccaggcacagggctgcaagcaccttcac
gttgtcacccctgactggctatggagctgtctggagcgctgggagagggtgcaggagcag
ctttacccactaaaggaggattactccaagatgcaaaggagcaacagtccagcaggtttc
cctgaaaataggggctcccttcagaagcctgttttccagcaagctcccatcctccgcaga
ccgccacctctggaaccagagatccggacctacgaccccgtcacggggaagctaatccgc
aagggcccacatgtgtctcggccgccaccctacctccaggtgccggggtctttgttgctg
catgatcacggagaacagtcttgtctcaggggaacgtcaaagagtccgcaggacggcgcg
acacactcgtctagccaagatgacgagcagccggggccatctcatcgtaaacgacagccg
agcatgtcagagacgatgcctctgtacactctttgcaaggaggatctagagagcatggat
aaagaggtggacgacatcttaggtgaggagagcgacaacgagagtgatgggcaagggaag
gagaagccagttaatgaggaggtggaggatgaagaggaggagcagccagagcagcagcag
caggaggagcaacaacaacaacaagagcagcagcagcagcagccaggagctggacagata
ggagatgtgctagttcctcaagcgcaaagcctggaagagaatcttcagactccatccagc
caggccagtgctggtgttctaaggggccagaaacgtaagattgaagaagctgaggaggag
gaggaggaggaggatgatgaggaggaggaggagaaggagaagaataaacaatttgctgac
gagtcgtccaaagactccatcgaggaggaggaaggcagcagctcagaggcagatgagatg
gctgcagcactggaagcagagctcaatgacttcatgtga
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