Streptomyces seoulensis: D0Z67_10110
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Entry
D0Z67_10110 CDS
T07029
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sseo
Streptomyces seoulensis
Pathway
sseo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0Z67_10110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sseo03400
]
D0Z67_10110
Enzymes [BR:
sseo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D0Z67_10110
DNA repair and recombination proteins [BR:
sseo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0Z67_10110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_22
AAA_11
HHH_5
Helicase_RecD
AAA_16
PIF1
PhoH
NPHP3_N
TraI_hel_assoc_N
AAA
UvrD_C
nSTAND3
DEAD
SLFN-g3_helicase
TrwB_AAD_bind
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QBJ90628
UniProt:
A0A4P6TYB2
LinkDB
All DBs
Position
complement(2154356..2156656)
Genome browser
AA seq
766 aa
AA seq
DB search
MAQQASRQTGNTTGERQLAELEGVLERITYADEETGYTVARVDTGRGGGDLLTVVGALLG
AQVGESLRMRGRWGSHPQYGKQFTCENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRIT
RHFGLDTLTVIEEEPKRLIEVPGLGPKRTRRIADAWEEQKAIKEVMLFLQTVEVSTSIAV
RIYKKYGDASISVVKNQPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQ
STDQGHCYLPEERLIADAVKLLQVDTGLVIECLAELAAPGEEGEEPGVVRERVPGPDGGE
PVTAVYLVPFHRAELSLAAQVSRLLRTGEDRMPAFRDVNWDKALAWLRGRTGTDLAPEQE
AAVRLALTEKVAVLTGGPGCGKSFTVRSVVELARARRAKVVLAAPTGRAAKRLAELTGAE
ASTVHRLLELRPGGDAAYDRERPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGD
VDQLPSVGAGEVLRDLLAQGSPVPAVRLTRVFRQAQRSGVVTNAHRINAGRHPLTEGLDD
FFLFVEDDTEEAGRLTVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGALNALLQQAV
TPGRPDVPEKRFGGRVFRVGDKVTQVRNNYDKGANGVFNGTVGVVTSLDPVEQRLTVLTD
EDEEVGYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKK
LVVLVGSRKAIGQAVRTVSAGRRCTALDFRLAGSVHLGENDRSNES
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaggcgtctcggcagacggggaacaccaccggcgaacggcagttggccgag
ctggagggggtgctggagcgcatcacctacgccgacgaggagaccggctacaccgtcgcc
cgcgtcgacaccggccggggtggcggcgacctgctcaccgtggtcggcgcgctgctcggc
gcccaggtgggggagtcgctgcggatgcggggccgctggggctcgcacccgcagtacggc
aagcagttcacctgcgagaactacacgaccgtcctccccgccacggtgcagggcatccgc
cgctacctcggctccggcctggtcaagggcatcggcccggtcttcgccgaccgcatcacc
cggcacttcggcctggacaccctgacggtgatcgaggaggagccgaagcgcctgatcgag
gtccccggcctcgggcccaagcgcaccaggcggatcgccgacgcctgggaggagcagaag
gcgatcaaggaggtgatgctcttcctccagaccgtcgaggtctccacctccatcgccgtg
cggatctacaagaagtacggcgacgcctcgatctccgtggtgaagaaccagccgtaccgg
ctcgccgccgacgtctggggcatcggcttcctcaccgccgacaagatcgcccagtccgtc
ggcatcccgcacgacagccccgaacgcgtgaaggcggggctccagtacgccctctcccag
tccaccgaccagggccactgctatctgcccgaggaacgcctcatcgccgacgcggtcaag
ctcctccaggtcgacaccggcctggtcatcgagtgcctggccgagctggccgctcccggt
gaggagggcgaggagcccggagtcgtacgggagcgggtgcccggaccggacggcggggag
cccgtcaccgccgtgtacctcgtccccttccaccgggccgaactctccctcgccgcccag
gtgtcgaggctgctgcgcaccggcgaggaccgcatgcccgccttccgggacgtgaactgg
gacaaggcgctcgcctggctgaggggccgtaccggcaccgacctcgcgccggagcaggag
gcggccgtgcggctcgcgctcaccgagaaggtcgccgtcctcaccggcggccccggctgc
ggcaagtccttcaccgtccgctcggtcgtcgaactcgcccgcgcccggcgggccaaggtg
gtgctggccgcgccgaccggacgcgccgccaagcggctggccgagctgaccggcgccgag
gcgtccaccgtgcaccggctgctggagctgaggcccggcggggacgccgcctacgaccgc
gaacgcccgctggacgccgacctcgtggtggtggacgaggcgtccatgctggacctgctg
ctcgccaacaagctggtcaaggccgtaccgcccggcgcccatctgctgttcgtcggcgat
gtggaccagctgcccagcgtcggcgccggggaggtgctgcgggatctgctggcccagggg
agtccggtgcccgccgtccggctcacccgcgtgttccgtcaggcccagcggtccggggtg
gtcaccaacgcgcaccggatcaacgcgggccgacatccgctcaccgaggggctggacgac
ttcttcctgttcgtcgaggacgacaccgaggaggcgggccggctcaccgtggacgtggcc
gcccgccgcatcccggcccgcttcggcctcgacccgcgccgggacgtgcaggtcctcgcg
ccgatgcaccggggcccggcgggcgccggcgccctcaacgccctgctccagcaggccgtc
accccgggccgccccgatgtgccggagaagcggttcggcggccgggtgttccgggtcggc
gacaaggtcacccaggtccgcaacaactacgacaagggggcgaacggcgtcttcaacggc
accgtgggcgtggtgacctcgctcgacccggtcgaacagcgcctgacggtactgaccgac
gaggacgaggaggtggggtacgaattcgacgaactggacgaactggcccatgcctacgcc
gtgaccattcaccgctcccagggcagtgaatacccggccgtggtgatcccggtcaccacc
ggagcctggatgatgctccagcgcaacctgctctacacggcggtcacccgcgccaagaag
ctggtggtgctggtgggttcgcgcaaggcgatcggccaggccgtacgcaccgtgtcggcc
ggccggcggtgcacggcgctcgacttcaggctcgccggttccgtacacctcggcgaaaat
gatcgatcaaatgagtcatga
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