Streptomyces seoulensis: D0Z67_11405
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Entry
D0Z67_11405 CDS
T07029
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sseo
Streptomyces seoulensis
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sseo03021
]
D0Z67_11405
Transcription machinery [BR:
sseo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0Z67_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_Crp_2
MarR_2
HTH_24
HTH_3
HTH_AsnC-type
HTH_10
GerE
HTH_37
HTH_31
KORA
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QBJ90849
UniProt:
A0A4P6TTT8
LinkDB
All DBs
Position
2449559..2450455
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AA seq
298 aa
AA seq
DB search
MSARLDGSPTHKATSTPPPEKLDHTIDPLDPLAGLPEIPPFDEVGPVDARALSKTLFERL
ESLEEGTYEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVGTVGLIKAIDRFEMS
RGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQRLDRAPTVAE
LAERLGLSHEEVVEGMAASNAYTASSLDAQPADDDTEGALADRIGYEDHGLEGIEYVESL
KPLIAELAPRDRKILSLRFVAGLTQSEIGEELGISQMHVSRLLSRTLSRLRKGLTLDE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccggctcgacgggtcgcctacccacaaagcgacgtcgacacccccaccggaa
aagctggaccacaccatcgaccctctcgaccccctggcggggctccccgagatcccgccc
ttcgacgaggtcggcccggtggacgcgcgagccctgtccaagacgctcttcgagcgcctg
gagtcgctggaggagggcacgtacgagtactcgtacgtccgcaacaccctcgtcgaactg
aatctggcgctggtgaagttcgccgcctcccggttccgctcccgcagcgagccgatggag
gacatcgtccaggtcggcacggtcggcctgatcaaggcgatcgaccgcttcgagatgtcg
cgcggggtcgagttcccgaccttcgcgatgccgaccatcatcggcgagatcaagcgcttc
ttccgtgacacctcgtggtccgtgcgcgtcccgcgccgcctgcaggagctgcggctcgac
ctggccaaggccggggacgagctggcccagcggctggaccgcgcccccaccgtcgcggaa
ctggccgagcgcctcgggctctcccacgaggaggtcgtcgagggcatggccgcctcgaac
gcctacaccgcctcctccctggacgcccagcccgccgacgacgacaccgagggcgccctc
gcggaccgcatcgggtacgaggaccacgggctcgaaggcatcgagtacgtcgagtcgttg
aagcccctcatcgccgaactggcgccccgcgaccggaagatcctctccctgcgcttcgtg
gcgggtctgacccagtccgagatcggcgaggagctgggcatctcccagatgcacgtctcc
cggctgctgtcccgtacgttgtcgcgcctgcgcaagggactcacgctggacgagtga
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