Streptomyces seoulensis: D0Z67_14040
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Entry
D0Z67_14040 CDS
T07029
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sseo
Streptomyces seoulensis
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sseo03021
]
D0Z67_14040
Transcription machinery [BR:
sseo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0Z67_14040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
NirdL-like_HTH
HTH_3
MarR
DUF134
HTH_5
DUF7343
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QBJ91299
UniProt:
A0A4P6TUZ6
LinkDB
All DBs
Position
3004994..3005857
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AA seq
287 aa
AA seq
DB search
MTVSASTAPPQAEAPATLPEPSAEPAAAPPPEKRRGADTRALTQVLFGELKNLTPGTPEH
NRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAM
PTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNGATEDLTTALGRSPSTAEIAERLRISEE
EVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRIGYEDPALDGVEHRDLVRHLLVQLPERE
QRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIEA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtgtcggccagtactgcgccgccccaggcggaggcgcccgcgaccctccccgag
ccctccgccgagcccgccgccgcaccccctcccgagaagcgccggggcgccgacacccgg
gccctgacccaggtgctcttcggcgagctgaagaacctcacccccggcaccccggagcac
aaccgggtccgcggggcgctcatcgaggccaacctcccgctggtgcgctacgccgccgcc
cgcttccgctcccgcaacgagccgatggaggacgtggtccaggtcggcaccatcgggctg
atcaacgccatcgaccgcttcgaccccgaccggggcgtgcagttcccgaccttcgccatg
ccgaccgtggtcggcgagatcaagcggtatttccgggacaacgtccgcaccgtgcacgta
ccgcgccggctgcacgagctgtgggtgcaggtgaacggggccaccgaggacctcaccacc
gcgctcggcagatcgccctccaccgccgagatcgccgaacgcctcaggatcagcgaggag
gaggtgctgtcctgcatcgaggcgggacgctcgtaccacgccacctcgctggaggccgcg
caggagggcgacgggctgcccggactgctggaccgcatcggctacgaggacccggcgctg
gacggcgtggagcaccgcgacctggtccggcacctgctggtccagctccccgagcgcgag
cagcgcatcctgctgctccgctactacagcaacctgacccagtcgcagatcagcgccgaa
ctcggtgtctcccagatgcacgtctcccggctgctcgcccggagcttccagcggctcaga
tcggccaaccggatcgaggcatga
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