Streptomyces seoulensis: D0Z67_14045
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Entry
D0Z67_14045 CDS
T07029
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sseo
Streptomyces seoulensis
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sseo03021
]
D0Z67_14045
Transcription machinery [BR:
sseo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0Z67_14045
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
DEC-1_N
HTH_24
DUF7343
MarR
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QBJ91300
UniProt:
A0A4P6TV98
LinkDB
All DBs
Position
3006172..3007131
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AA seq
319 aa
AA seq
DB search
MSAEQGSSKVLTKTVAAPQKLDALDVLDGFEGAPALDAAPAPAVPAPAPDTAPAAEEAVQ
LPLSSGDIDTRTLSRSLFLRLAALGEDSPERGYVRDTLIELNLPLVRYAAARFRSRNEPM
EDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRL
ALTKASDELSQRLDRSPTVPELAVALGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEG
SLADRLGYEDTALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMH
VSRLLTRTLSQLREGLVSD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgaagaccgtggcagcgccgcagaag
ctcgacgctctcgacgtcctcgacggcttcgagggtgctccggccctcgacgccgcgccc
gcccccgccgtcccggcaccggcgcccgacacggccccggcggccgaggaggccgtccaa
ctgccgttgtcctcgggggacatcgacacccgcacgctgtcccgctccctgttcctgcgg
ctcgccgcgctcggcgaggacagccccgagcggggttacgtccgggacaccctgatcgag
ctgaacctcccgctggtgcggtacgcggcggcccgcttccgctcgcgcaacgagccgatg
gaggacatcgtccaggtcggcaccatcgggctgatcaaggcgatcgaccgcttcgactgc
gaacggggcgtggagttcccgacgttcgcgatgccgacggtcgtgggcgagatcaagcgg
ttcttccgcgacacctcgtggtcggtgcgggtgccgcgccggctgcaggagctgcgcctg
gcgctgaccaaggcgagcgacgagctgtcccagcggctcgaccgctccccgaccgtgccg
gagctggcggtcgcgctcggagtctccgaggaggacgtggtcgacggtctggcggtgggc
aacgcctacaccgcctcctcgctcgactccccggcccccgaggacgacggcggcgagggc
tccctggccgaccgcctcggctacgaggacacggcgctggagggcgtggagtaccgggag
tcgctcaagccgctgctggccaagctgccgccgcgcgagcgccggatcatcatgctgcgc
ttcttcgccaacatgacccagtcacagatcggcgaggaggtcggcatctcgcagatgcac
gtctcgcggctgctgacccgcacgctgtcccagctccgcgagggtctcgtctccgactga
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