Streptomyces seoulensis: D0Z67_15990
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Entry
D0Z67_15990 CDS
T07029
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sseo
Streptomyces seoulensis
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sseo03032
]
D0Z67_15990 (topA)
03400 DNA repair and recombination proteins [BR:
sseo03400
]
D0Z67_15990 (topA)
Enzymes [BR:
sseo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D0Z67_15990 (topA)
DNA replication proteins [BR:
sseo03032
]
Prokaryotic type
DNA Topoisomerases
D0Z67_15990 (topA)
DNA repair and recombination proteins [BR:
sseo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D0Z67_15990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QBJ91640
UniProt:
A0A4P6TW50
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All DBs
Position
3429467..3432298
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AA seq
943 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPSGAAEVPEKYTGE
VRRLGVDVEHDFAPIYVINADKKAQVKKLRDLMKDSVELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRELNKKLVDAQETRRILDRLYGYEVSPVLWKKVM
PKLSAGRVQSVATRLIVERERERIAFRSAEYWDLTGTFATGRAGDASDPSSLVARLQSVD
GRRVAQGRDFDSLGQLKSANTLHLDEGSARALAAALETTRFSVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSETAIGAARAQVTQLYGA
DYLPPQPRSYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTSADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
SEGDPLAADEITVDGHATKAPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRIARGEAQSVPWLKRFYFGEGL
HTGAAADAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGDGIVLRVGRYGPYIERGEKD
TEQHQRADVPEDMAPDELTVELAEELLAKPSGDFELGTDPASGHQIIAKDGRYGPYVTEV
LPEGTPKTGKNAVKPRTASLFKSMALDTVTLEDALKLMSLPRVVGTDAEGVEITAQNGRY
GPYLKKGTDSRSLTAEEQLFTITLEEALAIYAQPKQRGRAAAKPPLKELGEDPVSAKPVV
VKDGRFGPYVTDGETNATLRSGDSVEEITPERGFELLAEKRAKGPAKKTAKKATAKKTAP
AKKTTAKKTAAKKTTAAAKKTTAKKTAAKKTTAAKATGSGSED
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcccct
gccaaggcgaagacgatcaagggctacctcggccccggatacgtggtcgaggcgagcgtc
gggcacatccgggacctccccagcggcgccgccgaggtgccggagaagtacaccggtgag
gtccgccgcctcggtgtggacgtggaacacgacttcgcgccgatctatgtcatcaacgcg
gacaagaaggcgcaggtcaagaagctccgggacctgatgaaggactccgtcgagctcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggaagtcctc
aagccgaagatccccgtgaagcggatggtcttccacgagatcaccaaggacgcgatccgc
gaggccgtcgccaacccgcgcgagctgaacaagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgaagctgtcggcgggccgcgtccagtccgtcgccacccggctcatcgtcgagcgcgag
cgggagcgcatcgccttccgctccgccgagtactgggacctgaccggcaccttcgccacc
ggccgcgccggtgacgcctcggacccgtcctcgctggtcgcccgcctccagagcgtcgac
ggccggcgtgtcgcccagggccgcgacttcgactccctggggcagctcaagagcgccaac
accctccacctcgacgagggaagcgcccgcgcgctcgccgccgccctggagaccacccgg
ttctccgtgcgctcggtggagtccaagccgtaccgccgctcgccgtacgccccgttccgt
acgacgaccctccagcaggaggccagccgcaagctcggcttcggcgcgaaggcgaccatg
caggtcgcccagaagctgtacgagaacggctacatcacgtacatgcgtaccgactccacg
acgctgagcgagacggccatcggcgccgcccgcgcccaggtcacgcagttgtacggggcc
gactacctcccgccgcagccgcgctcctacgccggcaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgcccctccggcgaccgcttccgcacccccgccgagaccggcctgacc
ggcgaccagttcaagctgtacgagctgatctggaagcgcaccgtcgcctcccagatgaag
gacgcgaccggcaacagcgtcaccgtcaagatcggcggcacctcggccgacggccgggac
gtcgagttcagcgcgtccggcaagacgatcaccttccacggcttcctgaaggcgtacgtc
gagggcgccgacgacccgaacgccgagctggacgaccgcgagcgccggctgccccaggtc
tccgagggcgacccgctggccgccgacgagatcacggtcgacggccacgccaccaaggcc
ccggcccgctacaccgaggcgtccctggtcaaggagctggaggagcgcgagatcggccgc
ccgtcgacctacgcgtcgatcatcggcacgatcctggaccgcggctacgtcttcaagaag
ggcacggccctggtgccgtccttcctgtccttcgccgtggtcaacctgctggagaagcac
ttcggccggctcgtcgactacgacttcaccgcccgcatggaggacgacctcgaccgcatc
gcgcgcggcgaggcccagtccgtgccgtggctcaagcgcttctacttcggcgagggcctg
cacaccggtgccgccgccgacgcgggcaacggcgacggcgaccacctcggcggcctgaag
gaactcgtcaccgacctgggcgcgatcgacgcccgcgaggtctcctcgttcccggtcggc
gacggcatcgtgctgcgcgtcggccgctacggtccgtacatcgagcggggcgagaaggac
accgagcagcaccagcgcgccgacgtccccgaggacatggcgccggacgagctgaccgtc
gagctggccgaggaactgctggccaagcccagcggcgacttcgagctgggcaccgacccg
gccagcggccaccagatcatcgccaaggacggccgctacggcccctacgtcaccgaggtg
ctccccgagggcaccccgaagaccggcaagaacgcggtcaagccgcgcacggcctcgctg
ttcaagtccatggcgctcgacacggtcacgctcgaggacgccctgaagctgatgtcgctg
ccccgcgtggtcggcaccgacgccgagggcgtggagatcaccgcgcagaacggccgctac
ggcccgtacctgaagaagggcacggactcgcgctcgctcacggcggaggagcagctcttc
acgatcacgctggaagaggcgctggcgatctacgcccagcccaagcagcgtggccgggcc
gccgccaagccgccgctgaaggagctgggcgaggacccggtctccgccaagccggtcgtg
gtcaaggacggccgcttcggtccgtacgtcaccgacggggagaccaacgccaccctgcgc
tccggcgacagtgtggaggagatcacccccgagcgcggcttcgagctgctcgccgagaag
cgggcgaaggggcccgccaagaagacggcgaagaaggccaccgccaagaagacggccccg
gcgaagaagaccaccgccaagaagacggcggccaagaagacgacggcggccgccaagaag
accacggcgaagaagacggccgccaagaagacgacggcggcgaaggcgacgggctccggc
tccgaggactga
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