Streptomyces seoulensis: D0Z67_16865
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Entry
D0Z67_16865 CDS
T07029
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sseo
Streptomyces seoulensis
Pathway
sseo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0Z67_16865 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sseo03019
]
D0Z67_16865 (recQ)
03400 DNA repair and recombination proteins [BR:
sseo03400
]
D0Z67_16865 (recQ)
Enzymes [BR:
sseo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0Z67_16865 (recQ)
Messenger RNA biogenesis [BR:
sseo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0Z67_16865 (recQ)
DNA repair and recombination proteins [BR:
sseo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D0Z67_16865 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
HHH
Motif
Other DBs
NCBI-ProteinID:
QBJ91790
UniProt:
A0A4P6TWJ2
LinkDB
All DBs
Position
3611302..3613296
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AA seq
664 aa
AA seq
DB search
MTTVSEGPAVAGSGALAALHRVFGYDAFRGEQEAVIEHVVAGGDALVLMPTGGGKSLCYQ
IPALVRPGTGVVVSPLIALMQDQVDALRALGVRAGFINSTQGFDERRTVEAEFLAGELDL
LYLAPERLRVDATLDLLSRGKISVFAIDEAHCVSQWGHDFRPDYLNLSLLGERWPDVPRI
ALTATATRATHEEITQRLNLPEARHFVASFDRPNIQYRIVPKADPRKQLLAFLREEHAGD
AGIVYCLSRNSVDRTAEFLTANGIAAVPYHAGLDAATRARHQSRFLREEGLVVVATIAFG
MGIDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGLPSTAWMAYGLNDVVQQRKLIQSGEG
DEAFRRRAASHLDAMLALCETVRCRRGQLLAYFGQDPTEEGCGNCDTCLTPPETWDGTVA
AQKVLSTVVRLQRERGQKFGTVQIVDILLGKRTAKVIQFDHDQLSVFGIGDDLAEGEWRG
VVRQLLAQGLLAVEGEYGTLVLTEASGEVLRREREVPLRKEPKRPTTARSAGRGERKGKT
AAAELPAELVPVFEALRAWRAEQAKEQGVPAYVIFHDATLREIATSHPRSVAELGTLSGV
GEKKLATYGEGVLAVLEGRPAPAPAGAPEATPKIPAPAPASTLAPAGDSPDLHWPDGEEE
PDWS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtgagcgaggggccggccgtagccgggagcggggcgctggccgcgctgcac
cgggtgttcgggtatgacgcgttccggggcgagcaggaagcggtcatcgagcatgtggtg
gccggcggggacgcgctggtgctcatgccgaccggtggcggaaagtcgctgtgctatcag
attccggcgctggtcaggccgggtaccggtgtcgtggtctcgccgctgatcgcgctgatg
caggaccaggtggacgcgctgcgcgcgctgggcgtgcgggcggggttcatcaactccacg
caaggtttcgacgagcgccggacggtggaggccgagttcctcgccggcgagctggacctg
ctctacctggccccggagcggctgcgcgtggacgccacgctcgacctcctctcccgaggc
aagatctccgtcttcgccatcgacgaggcgcactgtgtctcccagtggggccacgacttc
cgccccgactacctgaacctctcgctgctcggcgagcgctggccggacgtgccccggatc
gccctgaccgccacggccacccgcgccacccacgaggagatcacccagcggctgaacctc
cccgaggcccgccacttcgtcgccagcttcgaccgccccaacatccagtaccgcatcgtc
cccaaggccgaccccaggaagcagctcctcgccttcctccgcgaggagcacgccggcgac
gccggcatcgtctactgcctctcccgcaactccgtcgaccgcaccgccgagttcctcacc
gccaacggcatcgcggccgtcccgtaccacgcgggcctggacgcggccacacgcgcccgg
caccagtcccgcttcctgcgcgaggagggcctggtggtcgtcgccaccatcgccttcggc
atgggcatcgacaagcccgacgtccgcttcgtcgcccacctcgacctgcccaagtccatc
gagggctactaccaggagaccggccgcgcgggccgcgacggactgccctccacggcctgg
atggcgtacggcctcaacgacgtcgtgcagcagcgcaagctgatccagtccggcgagggc
gacgaggcgttccgccgccgcgccgcctcccacctggacgcgatgctggcgctgtgcgag
accgtccgctgccgccggggccagctcctcgcctacttcggccaggaccccaccgaggag
ggctgcggcaactgcgacacctgcctcaccccgccggagacctgggacggcacggtggcc
gcgcagaaggtgctctccaccgtggtccggctccagcgcgagcgcggccagaagttcggc
accgtgcagatcgtggacatcctgctcggcaagcgcaccgccaaggtgatccagttcgac
cacgaccagctctccgtcttcggcatcggcgacgacctcgccgaaggcgaatggcggggc
gtggtgcggcagttgctcgcgcagggactgctggccgtcgagggggagtacggcacgctg
gtgctcaccgaggccagcggcgaggtgctgcgccgggagcgcgaggtgccgctgcgcaag
gagcccaagcgcccgaccaccgcccgctccgccggccggggcgagcgcaagggcaagacc
gccgccgccgaactgcccgccgagctggtccccgtcttcgaggcgctgcgcgcctggcgc
gcggagcaggcgaaggagcagggcgtcccggcgtacgtcatcttccacgacgccaccctc
cgtgagatcgccaccagccacccccgctcggtggccgagctgggcacgctgagcggggtc
ggcgagaagaagctcgccacgtacggcgagggagtgctcgcggtcctggagggccggccg
gccccggccccggccggcgccccggaagcgaccccgaagatccccgccccggcccccgcc
agcaccctggcccccgccggggattcccccgacctccactggcccgacggtgaggaggag
cccgactggtcctga
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