Streptomyces seoulensis: D0Z67_17185
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Entry
D0Z67_17185 CDS
T07029
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sseo
Streptomyces seoulensis
Pathway
sseo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D0Z67_17185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sseo03021
]
D0Z67_17185
03400 DNA repair and recombination proteins [BR:
sseo03400
]
D0Z67_17185
Enzymes [BR:
sseo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D0Z67_17185
Transcription machinery [BR:
sseo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D0Z67_17185
DNA repair and recombination proteins [BR:
sseo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D0Z67_17185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
QBJ91845
UniProt:
A0A4P6TW57
LinkDB
All DBs
Position
3669741..3673640
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRQRDLPSLEAHVSVERQQIENRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGE
GRAFGSTAEATMAFDAGELALQSPVDIRFPVGTIPPRGWTPPAREEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVAISDVVVPEAKKEIVKGYEAQDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLSIAERG
ADGVLRKADNVETSVYARCLAEDIVVDGKVLAPAGTDLGDVLIDELVKYGVEEVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKLVVTPDDGSDETAFPISKRAKV
LVREGEHVEVGQQLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQENGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGAGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctggccaccgcggacgacatc
cgccagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcggatgggccacatcgagctcgccgctccc
gtcacccacatctggtacttcaagggcgttccgtcgcggctgggctacctgctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtacgtcgac
gaggagcgccgtcagcgcgacctgccgtcgctggaggcccacgtctccgtcgagcgtcag
cagatcgagaaccgccgcgactccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggcggacgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctccgtgaccgcgcccagcgcgagatcgaccgcctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctggaggaggaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagacctccaacagccccaagggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtggacgcc
ctcttcgacaacggtcgtcgtggtcgcccggtcaccggtcccggcaaccgcccgctgaag
tccctgagcgacatgctcaagggcaagcagggtcgtttccgtcagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgcggccgc
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggttctgctgaaccgt
gctcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcacgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgaactccgtgacaccaagggcgag
ggccgcgcgttcggctccacggccgaggcgaccatggcgttcgacgccggcgagctggcc
ctgcagtcgcccgtcgacatccgcttcccggtgggcaccatcccgccgcgtggctggacg
ccgccggcccgcgaggagggcgagcccgagtggcagcagggggactcgttccgtctgcgc
accaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggcgggcttctactgggcgacc
cgttccggcgtcaccgtggccatctccgacgtcgtcgttcccgaggcgaagaaggagatc
gtcaagggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgcgaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgccaagaacgagaccatcccgcgtccgatcaaggcgtccttccgtgagggcctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctcacccgtcgtctggtggacgtctcgcaggacgtcatc
atccgcgaggaggactgcggcaccgagcgcggcctcaagctgtcgatcgccgagcgcggc
gccgacggtgtgctgcgcaaggcggacaacgtcgagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtcgtcgacggcaaggtgctggccccggccggcaccgacctgggcgac
gtgctcatcgacgagctggtcaagtacggcgtcgaggaggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggtacctgcgcgatgtgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgtgtggtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgcgtgcggatcgaggagaccgagaagaccaagaagctcgtc
gtgaccccggacgacggcagcgacgagacggcgttcccgatctccaagcgcgccaaggtc
ctggtccgcgagggcgagcacgtcgaggtgggccagcagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggtcagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgcgtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtccaggagaac
ggacacccggcctccggccgtccgcagctcatgggtatcaccaaggcgtcgctggcgacc
gagtcgtggctgtccgcggcctccttccaggagacgacccgggtcctgacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
gccggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtag
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