Streptomyces seoulensis: D0Z67_19630
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Entry
D0Z67_19630 CDS
T07029
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sseo
Streptomyces seoulensis
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sseo03021
]
D0Z67_19630
Transcription machinery [BR:
sseo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0Z67_19630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
Sigma70_ECF
NirdL-like_HTH
MarR_2
HTH_24
MarR
IF2_N
HTH_3
HTH_Crp_2
HTH_AraC
GerE
DUF4423
Motif
Other DBs
NCBI-ProteinID:
QBJ92282
UniProt:
A0A4P6TZI7
LinkDB
All DBs
Position
complement(4192028..4193137)
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AA seq
369 aa
AA seq
DB search
MRNGDGPVRDEERGARELPANKAESLRAVPQDGPRHMADGVDGIPEQARPHPEDDSARAG
GEGAARSAPPGERGGEQPADRAEARARGRATGGTMSEHERYAGDTAPGAETVRAARHDPH
DRSGARALFVELRGMKDGSPEYAELRNRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATI
GLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLALTTATAEL
SQLHGRSPTVHELAQKLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDE
ALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQ
LREKLLVEE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaacggggacggtccggtgcgggacgaagagcgcggcgcgcgagaactgccggcc
aataaggccgagagcctgcgggcggtcccccaggacggcccccggcacatggccgacggc
gtcgacggcatccccgagcaggcccggccccacccggaggacgactccgcgcgggccggc
ggcgagggtgccgcacggagcgcgcctccgggggagcgcggcggggaacagcccgccgac
cgcgcggaggcgagggctcggggaagggctacgggcgggacgatgagcgagcacgagcga
tacgccggggacaccgcgccgggcgcggagaccgtccgggcggcacggcacgacccgcac
gaccgcagcggggcgcgggcgctcttcgtggagctgcgcggcatgaaggacggcagcccg
gagtacgcggagctgcgcaaccggctggtccggatgcatctgccgctcgtggagcatctg
gcgcgccgcttccgcaaccggggcgagccgctggacgacctgacccaggtcgccaccatc
ggcctgatcaagtcggtggaccggttcgacccggagcggggcgtggagttctccacgtac
gccactcccacggtcgtcggggagatcaagcggcacttccgcgacaagggctgggcggtc
cgggtgccgcgccggctccaggagctgcggctcgcgctgaccacggcgacggccgagctg
tcgcagctgcacggccgctcccccacggtgcacgagctggcccagaagctggcgatctcc
gaggaggaggtgctggaggggctggagtcggcgaacgcgtactcgacgctgtcgctggac
gtccccgacaccgacgacgagtccccggcggtcgccgacaccctcggcgcggaggacgag
gcgctggagggggtggagtaccgggagtcgctcaagccgctgctggaggacctcccgccg
cgtgagaagcgcatcctgctgctgcggttcttcggcaacatgacccagtcgcagatcgcg
caggaggtcggcatctcgcagatgcacgtctcccggctgctggcccgcaccctggcccag
ctgcgggagaagctcctggtggaggagtag
DBGET
integrated database retrieval system
