Streptomyces seoulensis: D0Z67_27315
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Entry
D0Z67_27315 CDS
T07029
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sseo
Streptomyces seoulensis
Brite
KEGG Orthology (KO) [BR:
sseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sseo03021
]
D0Z67_27315
Transcription machinery [BR:
sseo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0Z67_27315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Crp_2
HTH_23
MarR_2
MarR
HTH_3
HTH_31
HTH_37
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QBJ93619
UniProt:
A0A4P6U115
LinkDB
All DBs
Position
complement(5955443..5956303)
Genome browser
AA seq
286 aa
AA seq
DB search
MTTNVLSTGRMTEQGTPPAALPRVTAPTRVAPRDARGLSKLFFDQLAELEEGTPEFQYAR
NTLIEMNMSLVRFAAARFRGRGSGEMEDIVQVGMIGLIKAIDRFEISREVEFTSFAVPYI
VGEIKRFFRDTTWAVHVPRRLQEARTLLARANEELHSRLGRMPTTSELAELMSLPEDEVR
EARIASNGYTAASLDAVITGSEEGEGALADFIGDEDGGLALVDDFRTLAPLIAALGERDR
MIIHWRFVDELTQKEIGERLGVSQMHVSRLLTRILTGLRAGMLTTS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaacgtgctgagcaccggccggatgaccgagcagggaaccccgcccgccgcc
ctgccccgggtcaccgcccccacccgggtggccccccgggacgcgcgcggcctgtccaag
ctgttcttcgaccagctcgcggaactggaagagggcacgcccgagttccagtacgcgcgg
aacacgctgatcgagatgaacatgtccctggtccgcttcgcggccgcgcgcttccggggg
cgtggcagcggggagatggaggacatcgtccaggtcggcatgatcggcctgatcaaggcc
atcgaccggttcgagatctcccgcgaggtggagttcacctccttcgccgtcccgtacatc
gtcggcgagatcaagcgtttcttccgtgacaccacgtgggcggtgcacgtgccgcgccgc
ctccaggaggcccgcaccctgctggcgcgtgccaacgaggagctgcacagccggctgggc
cggatgccgaccacgagcgagctggccgagctgatgagcctgcccgaggacgaggtccgg
gaggcccggatcgcctccaacggctacacggcggcctccctggacgcggtcatcaccggc
agcgaggagggcgagggggcgctcgccgacttcatcggcgacgaggacggcggcctcgcc
ctggtcgacgacttccgcaccctggcgccgctcatcgccgccctgggcgagcgggaccgc
atgatcatccactggcggttcgtcgacgaactcacccagaaggagatcggcgagcgcctc
ggtgtgtcccagatgcacgtctcccggctgctcacccgcatcctgaccggcctgcgcgcg
ggcatgctcaccaccagctga
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