Selenomonas sputigena: Selsp_0761
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Entry
Selsp_0761 CDS
T01474
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssg
Selenomonas sputigena
Pathway
ssg03410
Base excision repair
ssg03430
Mismatch repair
ssg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Selsp_0761
03430 Mismatch repair
Selsp_0761
03440 Homologous recombination
Selsp_0761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssg03400
]
Selsp_0761
DNA repair and recombination proteins [BR:
ssg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Selsp_0761
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Selsp_0761
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Selsp_0761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
AEB99727
UniProt:
C9LW29
LinkDB
All DBs
Position
860009..861979
Genome browser
AA seq
656 aa
AA seq
DB search
MEKEWSLLPDTSARAVEFSQRIGTTPFTAALLLHRGITSDEEARAFLHPEKQPFHDPFLM
RDMEKAVSRIEQAIEAQERIVVYGDYDVDGITATSLLCRNLRQLGAAADYFIPHRQKDGY
GLHKETLDEIIAGGARLIVTVDCGISAVEEAAAAKDKVDLIITDHHLPGKELPKALAVID
PHRADCSYPDKNIAGVGVAFKLCQALWQKMRGKAFTGDLDIVALGTVADVVPLLGENRKI
VQQGLRVLKKSKRPGIQALLAVTELQEKEITAGHIGFVLAPRLNAAGRLASALRGVELLL
TEDGEEAQAIAEELDAANRERQAVEQEILQVAEKQIEEIDVKRAHVLVLHGEGWHPGVIG
IVASRIVERYYRPTVIIAEEDGIGKGSCRSIRGFHMFEALSACGEHLLGFGGHAQAAGLS
LRSADVASFREAMEAYAAKVLTEEDFVPILDIELELAPEKITEQLMTEIKLLEPYGMGNP
KPLFSTHGVRGSYARQIGKEGQHLKFELDGLDASIDVLAWGKGEEAPLVNRERIDIAYFP
EYHVWREKRSLQLMLEDFRPARAEAKHPDRDALASVYRFLLARQRAGEGLPADAEKLLAE
YLLHFPVMGIFTFQKALQIFEELGILLPDDGRYAFCPPQEKLDLQKSRIFREGNPL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaatggtcgctcttgcctgatacatcggcgagagctgtggaattttcccag
cgcatcggcacgacgcccttcacggcggcgcttcttctgcatcgcggcatcacatcggac
gaagaggcgcgggcgttccttcatccggaaaagcagccgtttcacgatccgttcttgatg
agggatatggaaaaggccgtctcgcgcatagagcaggcgatcgaagcgcaggagcgcatc
gtcgtctatggcgattacgacgtcgacggcatcacggcgacctcgcttctctgccgcaat
ctgcgtcagctcggcgcggctgcagactacttcattccgcatcgtcagaaggacggctac
gggctgcacaaggaaacgctcgatgagatcatcgctgggggcgccaggctcatcgtcacg
gtggactgcggcatctccgccgtcgaggaggcggcagcggcaaaagacaaggtcgatctc
atcatcaccgatcaccacctgccgggcaaggaactgcccaaagccctcgccgtcatcgat
ccgcatcgtgcagactgctcatatcccgacaagaacatcgcgggcgtgggcgtggcgttc
aagctctgccaagcgctttggcagaaaatgcgcggcaaggccttcacgggcgatcttgac
atcgtcgccctgggcacggtcgccgacgttgtgccgctcctcggggaaaatcggaagatc
gtgcagcaaggtctgcgcgtcttgaagaaatcgaagcgtccgggtattcaggcgcttctc
gctgtgacggaactccaagagaaggagatcacggccggacatatcggcttcgtgctcgcg
ccgcggctcaatgcggcgggacgcctggcgtccgcgctgcgcggcgtcgaattgctcctg
acggaggacggggaggaagcgcaggcgattgcggaggagcttgatgcggcgaatcgcgag
cgtcaggccgtggagcaggagatcctgcaggtggcagaaaaacagatcgaggagattgac
gtcaagcgagcgcatgtgctcgtgcttcatggagaaggctggcatcccggcgtcatcggc
atcgtggcctcgcgcatcgtcgagcgctattaccgtccgacggtcatcatcgcggaagaa
gacggcatcggcaagggatcgtgccgcagcatacgcggcttccacatgtttgaagctctt
tctgcctgcggggagcatcttctgggctttggcggccacgcacaggcggcggggctttcg
cttcgctcggcggacgtcgcttccttccgtgaggctatggaggcttatgcggcaaaggtg
ctgacggaagaggatttcgtgccgattctcgacatcgagctggaacttgcacccgagaag
attacggagcagctgatgacggagatcaagcttttggagccgtacggcatgggaaatccc
aagccgctcttttcgacgcacggcgttcgcggcagttatgcgcggcagatcggcaaggag
gggcagcacctgaagtttgagcttgacggcttggacgcgagcattgacgttctggcttgg
ggcaagggcgaggaggcgccgctcgtcaatcgcgagcgcatcgacatcgcgtattttccc
gaataccatgtatggcgcgagaagcgctctctgcagctcatgcttgaagattttcgtccg
gcacgcgccgaggcgaagcatcccgaccgtgacgcgctggcctcggtctatcgtttcctg
ctcgcacgtcaaagagcgggcgaaggtctgccggcagatgcggaaaaacttctggcagag
tatctgcttcatttccccgtcatgggaatcttcacgtttcaaaaagcgctgcagattttc
gaagaactcggcatcctgctgcctgacgacggacgatatgcgttctgcccgccgcaagag
aagctcgacttgcagaagtcgcgcatcttccgtgaaggaaatccgctgtga
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