Selenomonas sputigena: Selsp_0842
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Entry
Selsp_0842 CDS
T01474
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssg
Selenomonas sputigena
Pathway
ssg03030
DNA replication
ssg03430
Mismatch repair
ssg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Selsp_0842
03430 Mismatch repair
Selsp_0842
03440 Homologous recombination
Selsp_0842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssg03032
]
Selsp_0842
03400 DNA repair and recombination proteins [BR:
ssg03400
]
Selsp_0842
Enzymes [BR:
ssg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Selsp_0842
DNA replication proteins [BR:
ssg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Selsp_0842
DNA repair and recombination proteins [BR:
ssg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Selsp_0842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
AEB99806
UniProt:
F4EZP9
LinkDB
All DBs
Position
945148..945708
Genome browser
AA seq
186 aa
AA seq
DB search
MMNYIAIDFETATGSMNSACSVATVEVRDGQLKEGWTTLIQPPGLRFDSFNIGIHGISPK
DVTDAPTFAEVWEELKERLAGKIVVAHNASFDMGVLKASLLANRLQAPYFRTCCTVRIAR
KVWPALDDHKLNTVGAHLNINFRHHRALDDARTCAAILLFAGMETGTDDIEELAQKIGVR
IGHFGV
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactatatcgcgattgattttgaaacggcgacgggcagcatgaactccgcctgc
agcgtggctaccgtagaggtgcgggacggacagctaaaggaagggtggacgacgctcatt
cagccgcccggacttcgcttcgacagcttcaacatcggcatccacggcataagccccaaa
gatgtgacagatgcgccgaccttcgccgaggtctgggaagagctgaaggagcgccttgcc
ggcaagatcgtcgtcgcgcacaatgcgtccttcgacatgggcgtgctcaaggcgtcgctc
cttgccaatcgcctgcaggcgccgtattttcgcacatgctgcaccgtgcgcatcgcacgc
aaggtctggcctgctcttgacgatcacaagctcaacaccgtaggcgcgcatctcaatatc
aattttcgccaccaccgcgccctggacgatgccagaacgtgcgccgccatcctgcttttc
gcaggcatggaaacgggcaccgacgatatagaagagcttgcgcagaaaatcggcgtaagg
atcgggcatttcggcgtgtga
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