Selenomonas sputigena: Selsp_0845
Help
Entry
Selsp_0845 CDS
T01474
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssg
Selenomonas sputigena
Pathway
ssg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Selsp_0845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssg03019
]
Selsp_0845
03016 Transfer RNA biogenesis [BR:
ssg03016
]
Selsp_0845
Enzymes [BR:
ssg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Selsp_0845
Messenger RNA biogenesis [BR:
ssg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Selsp_0845
Transfer RNA biogenesis [BR:
ssg03016
]
Prokaryotic type
tRNA degradation factors
Selsp_0845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
KH_5
Motif
Other DBs
NCBI-ProteinID:
AEB99809
UniProt:
C9LVZ6
LinkDB
All DBs
Position
947166..949235
Genome browser
AA seq
689 aa
AA seq
DB search
MQSFEMQVGGRPLIIEQGKMAKQANGSVLVRYGDTAVLVAATASAEPREGIDFFPLTVDF
EEKMYAAGKIPGGFIKREGRPSESAILCSRLIDRPIRPLFPEGFRNDVQIIATVLCVDQD
NAPEIAGMIGASCALCVSDIPFAGPIAGVKVGRVDGELVINPTEAQRAVSDLNLTVAGSH
DAVMMVEAGANELPEEVILEAILFGHKEIQRIVEFQQEIAAACGKEKREVKLFLAPEELD
RAIRDYASSRLDEAVRNPDKLDRDEHIAAIGAEVLEHFLADYPENAKEIAAVTHKIVKES
VRRMITHEKIRPDGRALDEVRPVSCEVGLLPRTHGSGLFTRGQTQVLTITTLGSVGDEQI
IDGLGPEQSKHYIHQYNFPGYSVGEARPARGPGRREIGHGALAERALLPMIPSLDEFPYT
IRLVSEVLESNGSSSMGSVCGSTLSLMNAGVPIKRPVSGVAMGLVKDGDHYTILTDIQGM
EDALGDMDFKVAGTEKGVTAIQMDIKIAGITRDILLSALSQAKRGRAFILEKMLAVIDKP
AADLSPYAPRVTVMKIHVDKIREVIGSGGKTIKKIIDETGAQIDIQEDGTIFIAAADGEG
AKKAQQIIEDIVRDVEVGAVYKGRVTRIMNFGAFVEILPGKEGLCHISQLARHRVAQVED
VVHEGDELEVKVVEIDKQGRVNLSHKVLL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttttgaaatgcaggttggaggccgtccgctgatcatcgagcagggaaagatg
gcgaagcaggcgaacggctccgttcttgtccgttacggcgatacggcagttctcgtcgcg
gcgactgcgtcggcagagccgcgcgagggcatcgacttctttccgctgacggttgacttc
gaagaaaagatgtacgctgccggcaagattccgggcggcttcatcaagcgcgaaggccgc
ccgagcgaatcggcgattctttgcagccgtctcatcgaccgtccgatccgcccgctgttt
cccgagggtttccgcaacgatgtgcagatcatcgcgacggtgctctgcgtcgaccaggac
aatgctcccgagatcgcaggcatgatcggcgcttcgtgcgctctttgcgtctcggacatc
ccgtttgccggaccgatcgcaggcgtcaaggtcggccgcgtcgacggcgaactcgtcatc
aatccgacggaggcgcagcgtgcagtttccgacttgaatctgacggttgccggctcgcac
gacgccgtcatgatggtcgaggcgggagcgaacgagcttcccgaggaagtcatcctcgaa
gcaatcctcttcgggcacaaggagattcagcgcatcgtcgagttccagcaggagatcgcc
gctgcctgcggcaaggagaagcgcgaagtcaagctcttcctcgcgccggaagaactcgat
cgggcgattcgcgactacgcttcttcgcgtctcgacgaagctgtgcgcaatcccgacaag
ctcgaccgcgacgagcatatcgccgccatcggcgcggaggttctggagcatttccttgcg
gactatcccgagaacgccaaggagatcgccgccgtcacgcacaagatcgtcaaggagagc
gtgcgccgcatgatcacgcacgagaagatccgtcccgacgggcgtgcgctcgatgaggtg
cgccccgtgagctgcgaggtcggccttttgccgcgcacgcacggctcggggcttttcacg
cgcgggcagacgcaggtactcacgatcacgacgctcggctctgtcggcgacgagcagatc
atcgacggtcttggtcccgagcagtcgaagcactacattcatcagtacaacttccccggc
tacagcgtcggcgaggcgcgtcccgcacgcggtcccggcaggcgcgagatcggtcacggc
gctctggcggagcgtgcgctcctgcccatgattccctcgctcgatgagttcccctatacg
atccgcctcgtgtcggaggtcttggagtcgaacggctcaagctccatgggcagcgtctgc
ggcagcacgctctctctgatgaacgcgggcgttccgatcaagcgtcccgtgtcgggcgtc
gccatgggactcgtcaaggacggcgaccactatacgatcctgacggacatccagggcatg
gaggacgcgctcggtgatatggacttcaaggtcgcgggcacggagaagggcgtgacggcg
atccagatggacatcaagattgccggcatcacgcgcgacattctcctttcggcgctctcg
caggcgaagcgcggccgcgccttcatcttagagaagatgctcgccgtcatcgacaagccg
gcggccgatctctcgccctatgcgccgcgcgtcacggtcatgaagatccatgtcgacaag
atccgcgaggtcatcggctcgggcggcaagacgatcaagaagatcattgatgagacgggt
gcgcagatcgacatccaggaggacggcacgatcttcatcgcggcggcggacggcgagggc
gcaaagaaggcgcagcagatcatcgaggacatcgtgcgcgatgtggaagttggcgctgtc
tacaagggcagggtcacgcgcatcatgaacttcggcgctttcgttgaaatcctgccgggc
aaggaggggctttgccacatctcccagctcgcacgccatcgcgtcgctcaggtcgaggac
gtagtgcatgaaggcgatgagcttgaagtcaaggtcgtcgagatcgacaagcagggacgt
gtgaacctctcgcacaaggttcttctctga
DBGET
integrated database retrieval system
