Selenomonas sputigena: Selsp_0880
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Entry
Selsp_0880 CDS
T01474
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ssg
Selenomonas sputigena
Brite
KEGG Orthology (KO) [BR:
ssg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssg03032
]
Selsp_0880
03036 Chromosome and associated proteins [BR:
ssg03036
]
Selsp_0880
03400 DNA repair and recombination proteins [BR:
ssg03400
]
Selsp_0880
DNA replication proteins [BR:
ssg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Selsp_0880
Chromosome and associated proteins [BR:
ssg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Selsp_0880
DNA repair and recombination proteins [BR:
ssg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Selsp_0880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
TFIIB
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AEB99844
UniProt:
C9LW59
LinkDB
All DBs
Position
988313..988591
Genome browser
AA seq
92 aa
AA seq
DB search
MNKTELVANVAEKAGLSKKVAEQALGAIIESIEEALVEGDKVQLIGFGTFEVKDRAARTG
RNPQTGKEIKIAASRNPVFKAGKALKDAVNNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaacggaattagtggctaacgtagcggaaaaagcaggtctgtcgaagaaggtt
gccgagcaggctctgggcgcgatcatcgagagcatcgaagaggctcttgtcgagggcgac
aaggttcagctcatcggcttcggcacgttcgaggtcaaggatcgcgctgcccgtaccggc
cgcaatccgcagacgggcaaggaaatcaagattgccgcttcgaggaatcctgttttcaag
gcgggcaaggctttgaaggacgctgtcaacaacaagtga
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integrated database retrieval system
