Selenomonas sputigena: Selsp_1139
Help
Entry
Selsp_1139 CDS
T01474
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssg
Selenomonas sputigena
Pathway
ssg03420
Nucleotide excision repair
ssg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Selsp_1139
03430 Mismatch repair
Selsp_1139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssg03400
]
Selsp_1139
Enzymes [BR:
ssg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Selsp_1139
DNA repair and recombination proteins [BR:
ssg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Selsp_1139
MMR (mismatch excision repair)
Other MMR factors
Selsp_1139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_14
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEC00099
UniProt:
F4EUS4
LinkDB
All DBs
Position
1275894..1278161
Genome browser
AA seq
755 aa
AA seq
DB search
MDIFQGLNPMQREAVAHIDGPLLIMAGAGSGKTKVLTCRIANLLAHGVPPYSILAITFTN
KAAAEMRERVDRMIGGLGKDVWLSTFHSFCARFLRREIEAGEVYKKNFVIYDTSDSKTVI
KACLKELNLDDKQFAPAKVQNAISNAKNLMLGPRAYARQADTFHAKKIAELFSLYDKKLR
ENNALDFDDLLLLAVDLLENNDELRQKYQRRFRYILIDEYQDTNGAQYRLTTLLAGGHHN
LCVVGDADQSIYGWRGADISNILNFEKDFPEAKTIKLEQNYRSTKNILAAANAVIRNNEN
RKPKKLWTENAVGEKIALYQANDERDEARFVVDTVQKQKTLFSVDYGDIAVLYRTNAQSR
VLEEAMMTAGIPYTMVGGLKFYDRMEIKDIIAYLHVLYNPFDTVSLLRIINVPKRGIGTS
TIAKLTEYAAMREDSLFDVLSSPEALEAMGFKTRTKNLLEAFAALLFDLMGKLAAMPLSS
FIEALLDDTGYIKDLEKQDTPEAQTRIENLREFVGVAREFEKTEEEPTLENFLNQIALVS
DVDTANMEDDRVTLMTLHSAKGLEFPVVFLVGMEEGIFPHARTLLEPSEIEEERRTCYVG
ITRAERKLYLSYARYRTLYGKGNVYPPSRFLAEIPETYLEKAQAFGRSAFLESRGMGRPQ
SAFEILQSLQRTTAPSASPSPVPSSPREVRPATSAAIRPSMEVAWRAGDKARHGKWGVGT
VVSVKGEGEEVELKIAFPQIGIKGLMQKYAPIEKV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtggatatttttcagggcttgaatcccatgcagcgggaagctgtcgcgcatatcgacggc
ccgctgctcatcatggcgggcgccggttcgggaaagacgaaggtgctcacctgtcgcatc
gccaatctcttggcacacggcgtgccgccctacagcatcttggcaatcacgttcacgaac
aaggcggcggcagagatgcgcgagcgcgtcgatcgcatgatcggcggcttgggcaaggat
gtctggctcagcacatttcattcgttctgcgcacgctttctgcggcgtgagattgaagcg
ggcgaagtctacaagaaaaatttcgtcatctacgatacgtcagactccaagaccgtcatc
aaggcgtgcctcaaggagctgaatctcgatgacaagcaatttgctcccgcaaaggtgcag
aacgccatatcgaacgcgaaaaatctcatgctcgggccgcgcgcctacgcgcggcaggcg
gatacgttccatgcgaagaagattgcggagcttttcagcctgtatgacaagaagctgcgc
gagaacaacgccttggattttgacgatctcctgctgctcgccgtcgaccttctggaaaat
aacgacgaactgcgtcaaaagtatcagcggcgtttccgctacatcctcatcgacgaatat
caggatacgaacggcgcacagtacaggctcacaacgcttctggcaggcggtcatcacaat
ctctgcgtcgtcggcgacgcagatcagtccatctacggctggcgcggcgcggacatcagc
aacatcttgaatttcgagaaggactttcccgaggcgaagacgatcaaacttgagcagaat
tatcgctcgacgaagaatatcttggccgcagccaatgccgtcatccgaaacaatgagaac
cgcaagccgaagaagctctggacggaaaacgctgtaggggagaagatcgccctttatcag
gcgaatgacgagcgcgacgaggcaagattcgtcgtagataccgtgcagaagcagaagacg
ctcttttccgtcgattatggcgatatcgccgtgctttaccgcacgaatgcgcagtcgcgt
gtcctcgaagaggccatgatgacggcggggattccctatacgatggtcggcggcttgaag
ttctacgaccgcatggaaatcaaggacatcattgcctatctgcacgtcctctacaacccg
tttgacaccgtgagcctcctgcgcatcattaacgtgcccaagcgcggcatcggcacatcg
acgatcgccaagctcacggagtatgccgccatgcgtgaagactccctcttcgatgtcctg
tcgagtcccgaagcgctcgaagctatgggattcaagacgcgcacgaagaatctgctcgaa
gccttcgccgcgcttctctttgacctcatgggcaaacttgccgctatgccgctttcttcc
tttatcgaagccttgcttgacgatacgggttatatcaaggatttggagaagcaggatacg
cccgaggcgcagacgcgcatcgagaacttgcgagaattcgtcggcgtggcgcgagaattt
gaaaagacggaggaagagccgactttggaaaatttcctcaaccagatcgcactcgtctcc
gatgtcgatacagcgaacatggaggacgaccgcgtgacgctcatgacgcttcattcggca
aagggcttggagttccccgtcgtctttctcgtgggcatggaggagggtatctttccccat
gcgcgcacgctgcttgagccgagcgaaatcgaggaagaacgccgcacctgctatgtcggc
atcacgcgcgctgaacgcaagctctacttgagctacgcgcgctatcggacgctttacggc
aaggggaatgtctatccgccgtcgagattcctcgcggagattcccgaaacgtatttggaa
aaggcacaggcttttgggcggagcgcgtttttagagtcgcggggcatgggaaggccgcag
tccgccttcgagattctgcaaagtttgcagcggacgacagccccttctgcatcgccttct
cctgtaccttcttcccctcgcgaggtgcgtcctgccacgtccgccgcaattcgcccgagc
atggaagtggcatggcgtgcgggcgacaaggctcgtcatggcaaatggggtgtcggtaca
gtcgtctcggtcaagggggaaggcgaagaagtcgagctgaagatcgccttcccgcaaatc
ggcatcaagggactcatgcagaagtatgctcccatcgagaaagtctga
DBGET
integrated database retrieval system
