KEGG   Selenomonas sputigena: Selsp_1196
Entry
Selsp_1196        CDS       T01474                                 
Name
(GenBank) ATP-dependent nuclease subunit B
  KO
K16899  ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
Organism
ssg  Selenomonas sputigena
Brite
KEGG Orthology (KO) [BR:ssg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssg03400]
    Selsp_1196
Enzymes [BR:ssg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Selsp_1196
DNA repair and recombination proteins [BR:ssg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Selsp_1196
SSDB
Motif
Pfam: ADDB_N PDDEXK_1 UvrD-helicase
Other DBs
NCBI-ProteinID: AEC00156
UniProt: F4F017
LinkDB
Position
complement(1348870..1352304)
AA seq 1144 aa
MIEFILGRAGTGKTHACLSSMAERMKAKPMGSALVLLLPEHATYRAERRLAAMMAGAGEG
FVRGLVFGFKRFARHVLQETGGAAAARITSVGKRLLLKRILAEEGESLQAFARAAKQRGF
TQTLERAMEEMRSYGIDGDALLQAQPALADDDLCRKLADLALIYSRYREKMAGRYNDTGD
MLDALAEKIPSSRLLEGAEVWVDGFSFFNPQERKILAALFQKAKNVHITLTFDPTDEAAM
QREGSLFYRQAQTLQQLRRLAQEMQIPVRVRSLEERRRFQSDALAAIERTAFSFPLVPQA
GAAGVALVEAATRRLEMEAAAADIVRLCREKGLRWRDIAILTRDEAAYGDMLALTLEDCG
IPYFRDNKREGVHHPLAELVRSAFEVLRGWRYDAMFRALKTGFFKKTRGQIDLLENYVLE
FGIRGSSWTMEEDWHWHRRRSLDEEEEGATQKEAERLCQINSCRRAVAEPLQEFAAQVKA
ASTVRGYAEALYRLLLALDVPQTLERWADEAEKAGRLAESREHRQIWDDVISLLEQMAET
SGDETIKVREFEDVLGDGLDALQISLIPPGLDYVTVADFDQNSVENARAIYILGANEGVM
PRRSQEKGLLSDADRLHLKEAGLELPQGSVEGSFNERFLLYKGFTEARDYLWVSYALADT
EGKALLPASLLGQIRTVLPAVSLQTVPLEGAERRLFAGGRQAVTALAAALRSYREKGTLD
PFWCDVYNWALGERKMSIVLQKVLQGIFSHAAAELLPKELAAALYTKNRRLRGSVTRFES
FRACPFQHFARYGLHLAERPAHGFRTLDLGVLLHAALREFGERLKKDGRRWRDVGEEECG
EILHEILGLLAPRLQNEILLSSKQYENLLVRIEETAKKALVRLIELDAASEFRPVAFERS
FGRGAGSLPPLTYALADGSSLEITGQIDRIDMDEAGRYFLILDYKTGAAYINLVEVYYGL
RLQLLTYLLVARNFLAHTEEKELLPAAMLYCFLKNPLVTAPHRIDEAEAKKLLQGQLKMP
GWVLADADVIRALDSTFSFTKVALTKKGEIDKRKLDYVKTEEEFAILLDYIAYILKDTGR
QILSGEVRALPYRLKDRTACRFCPYIAVCGFDPLVPGFSYRWLQSHEDAELMDSMELKGQ
EDAE
NT seq 3435 nt   +upstreamnt  +downstreamnt
atgatcgagttcatcttggggcgtgcgggaacgggaaagacgcacgcctgcctctccagc
atggcggagcgcatgaaggcaaagcctatgggcagcgccctcgtgcttctcctgcccgaa
catgcgacgtatcgcgcagagcgccgcctcgccgccatgatggcgggtgcgggcgaggga
ttcgtgcgcggtctcgtgttcggcttcaagcgctttgcgcgtcatgtgctgcaggagacg
ggcggcgcggcagccgcacgcatcacgagcgtgggcaaacggttgctgctgaagcgcatc
ctcgccgaagaaggcgagagcctgcaggcattcgcgcgtgcggcgaagcagcgcggtttc
acgcagacgctggaaagagccatggaggagatgcgcagctacggcatcgacggcgacgcc
ctgctgcaggcgcaaccagcgctcgctgacgacgatctgtgccggaagctcgcggatctc
gcgctcatctacagccgctacagagagaagatggcggggcgctacaacgatacgggcgac
atgctcgacgcgcttgccgagaagattccttcctcgcgccttttggagggggcggaggta
tgggttgacggcttctccttcttcaacccgcaggagagaaagattcttgcggcgctcttc
caaaaggcgaagaatgtgcatatcacgctgacgttcgatccgacggacgaggcggccatg
cagcgcgagggcagtctcttctatcggcaggcgcagaccttgcagcagctgcggcgattg
gcgcaggagatgcagattcccgtgcgcgtgcgcagcttggaggagaggcggcgctttcaa
agcgatgcgctcgccgccatcgagcgcacggcgttttccttccctctcgtaccgcaggca
ggggcggcgggcgtcgcgctcgtcgaggcggcgacgaggcggctggaaatggaggcggcg
gctgctgacatcgtgcgcctgtgccgcgagaagggactgcgctggcgcgacatcgccatc
ttgacgcgcgacgaggctgcctatggcgacatgctcgctctgacgcttgaggactgcggc
atcccgtactttcgcgacaacaagcgtgagggtgtccatcatccgctcgccgagctcgtg
cgctcggccttcgaggtgctgcgcggctggcgctacgatgccatgttccgcgcactgaag
acgggctttttcaaaaagacgcgcggtcagatcgacctgcttgaaaattatgtgctggaa
ttcggcattcgcggctcgagctggacgatggaagaggattggcattggcatcgccgccgc
agtttggacgaggaagaagagggcgcgacgcagaaggaagcggagcgcctctgtcagatc
aattcctgccgccgcgccgtggcagagcccctgcaggagtttgcagcgcaggtgaaggcg
gcgtcgacggtgcgtggctacgccgaggcgctttatcgtctgctgctcgcgctcgacgtg
ccgcagacgttggagcggtgggcggacgaggccgagaaggcgggtcgcctcgctgagtcg
cgtgagcatcgtcaaatctgggacgacgtcatctccctgttggaacagatggcagagacg
agcggcgacgagacgatcaaggtgcgcgaatttgaggacgtcttgggcgacgggcttgat
gccctgcagatttccttgattccgccgggactcgactatgtgaccgtcgctgacttcgac
cagaacagcgtcgaaaatgcacgcgccatctacattctcggcgcgaacgagggcgtcatg
ccgcgccgcagccaggagaaggggctgctctccgatgctgaccggctgcatttgaaggag
gccgggctggagcttccgcaaggctccgtcgagggaagtttcaacgagagattcctgctc
tacaaaggattcacggaagcgcgtgactatctgtgggtttcctatgctctcgccgatacg
gagggaaaggctctcctgcccgcctctctgctcgggcagatccgcaccgtcctgcctgcc
gtctctttgcagaccgttccgttggagggggcggagcgccgcctctttgcgggcggtcgt
caggcggtgacggctctggcggcggcgctgcgcagctaccgcgagaaggggacgcttgat
cctttttggtgtgacgtctacaactgggcgttgggggagagaaagatgagcattgtcctg
cagaaagtgctgcagggcatattttcgcatgctgcggcggagcttttgcccaaggagctg
gcggcggcgctctacacgaagaatcgccgtctgcgcggcagcgtcacgcgctttgagtca
ttccgcgcctgtcccttccagcacttcgcacgctatggcctgcatctggcggagcgcccc
gcgcatggctttcgcacactcgacctcggcgtgctgcttcatgcggctctgcgcgaattt
ggcgagcggctgaaaaaggacggcagacgttggcgcgacgtaggtgaagaggagtgcggc
gagatcctgcatgagatccttggcctgcttgcgccgcggctgcagaatgaaatcctcttg
agctcgaagcagtacgagaatctcctcgtgcgcatcgaggagacggcgaaaaaggcgctc
gtgcgcctcatcgaactcgatgcggccagcgagttccgccccgtcgccttcgagcgttcc
ttcggacgcggtgcgggcagcctgccgccgctgacgtatgcgctcgctgacggctcttcg
ctcgaaatcaccggacagatcgaccgcatcgacatggacgaggcggggcgctacttcctc
attctcgactacaagacgggcgcggcatacatcaacctcgtcgaggtgtactacggtctg
aggctgcagcttctgacctatctgctcgtcgccagaaatttcctcgcgcacaccgaggaa
aaggaacttctgcccgcagcgatgctctactgcttcttgaagaatccgctcgtcacagcg
ccccatcgcatcgatgaggcagaggcgaagaagcttctgcaggggcagctcaagatgccc
ggctgggtgctcgcggacgccgacgtcatacgcgcactcgacagcaccttcagcttcacg
aaggtcgccttgacgaagaaaggcgagatcgacaaacggaagctcgattacgtcaagacg
gaagaggagttcgccatcctgctcgactacatcgcctacattctcaaggatacgggaagg
cagatcctctcgggcgaggtgcgcgccctgccgtaccgcctcaaggacaggacggcatgc
cgcttctgcccgtacatcgccgtctgcggcttcgacccgctcgtgccgggcttttcctat
cggtggctacaaagccacgaggatgcggaattgatggacagcatggaattgaaaggacag
gaggatgccgaatga

DBGET integrated database retrieval system