Entry |
|
Name |
(GenBank) ATP-dependent nuclease subunit B
|
KO |
K16899 | ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] |
|
Organism |
ssg Selenomonas sputigena
|
Brite |
KEGG Orthology (KO) [BR:ssg00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ssg03400]
Selsp_1196
Enzymes [BR:ssg01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Selsp_1196
DNA repair and recombination proteins [BR:ssg03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Selsp_1196
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1348870..1352304)
|
AA seq |
1144 aa
MIEFILGRAGTGKTHACLSSMAERMKAKPMGSALVLLLPEHATYRAERRLAAMMAGAGEG
FVRGLVFGFKRFARHVLQETGGAAAARITSVGKRLLLKRILAEEGESLQAFARAAKQRGF
TQTLERAMEEMRSYGIDGDALLQAQPALADDDLCRKLADLALIYSRYREKMAGRYNDTGD
MLDALAEKIPSSRLLEGAEVWVDGFSFFNPQERKILAALFQKAKNVHITLTFDPTDEAAM
QREGSLFYRQAQTLQQLRRLAQEMQIPVRVRSLEERRRFQSDALAAIERTAFSFPLVPQA
GAAGVALVEAATRRLEMEAAAADIVRLCREKGLRWRDIAILTRDEAAYGDMLALTLEDCG
IPYFRDNKREGVHHPLAELVRSAFEVLRGWRYDAMFRALKTGFFKKTRGQIDLLENYVLE
FGIRGSSWTMEEDWHWHRRRSLDEEEEGATQKEAERLCQINSCRRAVAEPLQEFAAQVKA
ASTVRGYAEALYRLLLALDVPQTLERWADEAEKAGRLAESREHRQIWDDVISLLEQMAET
SGDETIKVREFEDVLGDGLDALQISLIPPGLDYVTVADFDQNSVENARAIYILGANEGVM
PRRSQEKGLLSDADRLHLKEAGLELPQGSVEGSFNERFLLYKGFTEARDYLWVSYALADT
EGKALLPASLLGQIRTVLPAVSLQTVPLEGAERRLFAGGRQAVTALAAALRSYREKGTLD
PFWCDVYNWALGERKMSIVLQKVLQGIFSHAAAELLPKELAAALYTKNRRLRGSVTRFES
FRACPFQHFARYGLHLAERPAHGFRTLDLGVLLHAALREFGERLKKDGRRWRDVGEEECG
EILHEILGLLAPRLQNEILLSSKQYENLLVRIEETAKKALVRLIELDAASEFRPVAFERS
FGRGAGSLPPLTYALADGSSLEITGQIDRIDMDEAGRYFLILDYKTGAAYINLVEVYYGL
RLQLLTYLLVARNFLAHTEEKELLPAAMLYCFLKNPLVTAPHRIDEAEAKKLLQGQLKMP
GWVLADADVIRALDSTFSFTKVALTKKGEIDKRKLDYVKTEEEFAILLDYIAYILKDTGR
QILSGEVRALPYRLKDRTACRFCPYIAVCGFDPLVPGFSYRWLQSHEDAELMDSMELKGQ
EDAE |
NT seq |
3435 nt +upstreamnt +downstreamnt
atgatcgagttcatcttggggcgtgcgggaacgggaaagacgcacgcctgcctctccagc
atggcggagcgcatgaaggcaaagcctatgggcagcgccctcgtgcttctcctgcccgaa
catgcgacgtatcgcgcagagcgccgcctcgccgccatgatggcgggtgcgggcgaggga
ttcgtgcgcggtctcgtgttcggcttcaagcgctttgcgcgtcatgtgctgcaggagacg
ggcggcgcggcagccgcacgcatcacgagcgtgggcaaacggttgctgctgaagcgcatc
ctcgccgaagaaggcgagagcctgcaggcattcgcgcgtgcggcgaagcagcgcggtttc
acgcagacgctggaaagagccatggaggagatgcgcagctacggcatcgacggcgacgcc
ctgctgcaggcgcaaccagcgctcgctgacgacgatctgtgccggaagctcgcggatctc
gcgctcatctacagccgctacagagagaagatggcggggcgctacaacgatacgggcgac
atgctcgacgcgcttgccgagaagattccttcctcgcgccttttggagggggcggaggta
tgggttgacggcttctccttcttcaacccgcaggagagaaagattcttgcggcgctcttc
caaaaggcgaagaatgtgcatatcacgctgacgttcgatccgacggacgaggcggccatg
cagcgcgagggcagtctcttctatcggcaggcgcagaccttgcagcagctgcggcgattg
gcgcaggagatgcagattcccgtgcgcgtgcgcagcttggaggagaggcggcgctttcaa
agcgatgcgctcgccgccatcgagcgcacggcgttttccttccctctcgtaccgcaggca
ggggcggcgggcgtcgcgctcgtcgaggcggcgacgaggcggctggaaatggaggcggcg
gctgctgacatcgtgcgcctgtgccgcgagaagggactgcgctggcgcgacatcgccatc
ttgacgcgcgacgaggctgcctatggcgacatgctcgctctgacgcttgaggactgcggc
atcccgtactttcgcgacaacaagcgtgagggtgtccatcatccgctcgccgagctcgtg
cgctcggccttcgaggtgctgcgcggctggcgctacgatgccatgttccgcgcactgaag
acgggctttttcaaaaagacgcgcggtcagatcgacctgcttgaaaattatgtgctggaa
ttcggcattcgcggctcgagctggacgatggaagaggattggcattggcatcgccgccgc
agtttggacgaggaagaagagggcgcgacgcagaaggaagcggagcgcctctgtcagatc
aattcctgccgccgcgccgtggcagagcccctgcaggagtttgcagcgcaggtgaaggcg
gcgtcgacggtgcgtggctacgccgaggcgctttatcgtctgctgctcgcgctcgacgtg
ccgcagacgttggagcggtgggcggacgaggccgagaaggcgggtcgcctcgctgagtcg
cgtgagcatcgtcaaatctgggacgacgtcatctccctgttggaacagatggcagagacg
agcggcgacgagacgatcaaggtgcgcgaatttgaggacgtcttgggcgacgggcttgat
gccctgcagatttccttgattccgccgggactcgactatgtgaccgtcgctgacttcgac
cagaacagcgtcgaaaatgcacgcgccatctacattctcggcgcgaacgagggcgtcatg
ccgcgccgcagccaggagaaggggctgctctccgatgctgaccggctgcatttgaaggag
gccgggctggagcttccgcaaggctccgtcgagggaagtttcaacgagagattcctgctc
tacaaaggattcacggaagcgcgtgactatctgtgggtttcctatgctctcgccgatacg
gagggaaaggctctcctgcccgcctctctgctcgggcagatccgcaccgtcctgcctgcc
gtctctttgcagaccgttccgttggagggggcggagcgccgcctctttgcgggcggtcgt
caggcggtgacggctctggcggcggcgctgcgcagctaccgcgagaaggggacgcttgat
cctttttggtgtgacgtctacaactgggcgttgggggagagaaagatgagcattgtcctg
cagaaagtgctgcagggcatattttcgcatgctgcggcggagcttttgcccaaggagctg
gcggcggcgctctacacgaagaatcgccgtctgcgcggcagcgtcacgcgctttgagtca
ttccgcgcctgtcccttccagcacttcgcacgctatggcctgcatctggcggagcgcccc
gcgcatggctttcgcacactcgacctcggcgtgctgcttcatgcggctctgcgcgaattt
ggcgagcggctgaaaaaggacggcagacgttggcgcgacgtaggtgaagaggagtgcggc
gagatcctgcatgagatccttggcctgcttgcgccgcggctgcagaatgaaatcctcttg
agctcgaagcagtacgagaatctcctcgtgcgcatcgaggagacggcgaaaaaggcgctc
gtgcgcctcatcgaactcgatgcggccagcgagttccgccccgtcgccttcgagcgttcc
ttcggacgcggtgcgggcagcctgccgccgctgacgtatgcgctcgctgacggctcttcg
ctcgaaatcaccggacagatcgaccgcatcgacatggacgaggcggggcgctacttcctc
attctcgactacaagacgggcgcggcatacatcaacctcgtcgaggtgtactacggtctg
aggctgcagcttctgacctatctgctcgtcgccagaaatttcctcgcgcacaccgaggaa
aaggaacttctgcccgcagcgatgctctactgcttcttgaagaatccgctcgtcacagcg
ccccatcgcatcgatgaggcagaggcgaagaagcttctgcaggggcagctcaagatgccc
ggctgggtgctcgcggacgccgacgtcatacgcgcactcgacagcaccttcagcttcacg
aaggtcgccttgacgaagaaaggcgagatcgacaaacggaagctcgattacgtcaagacg
gaagaggagttcgccatcctgctcgactacatcgcctacattctcaaggatacgggaagg
cagatcctctcgggcgaggtgcgcgccctgccgtaccgcctcaaggacaggacggcatgc
cgcttctgcccgtacatcgccgtctgcggcttcgacccgctcgtgccgggcttttcctat
cggtggctacaaagccacgaggatgcggaattgatggacagcatggaattgaaaggacag
gaggatgccgaatga |