Selenomonas sputigena: Selsp_1440
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Entry
Selsp_1440 CDS
T01474
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ssg
Selenomonas sputigena
Pathway
ssg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Selsp_1440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssg03400
]
Selsp_1440
Enzymes [BR:
ssg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Selsp_1440
DNA repair and recombination proteins [BR:
ssg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Selsp_1440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
TrwB_AAD_bind
AAA_30
Zn_ribbon_6
DUF2321
PIF1
zf-CHY
SLFN-g3_helicase
AAA_19
cobW
AAA_16
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEC00398
UniProt:
F4EUY5
LinkDB
All DBs
Position
complement(1596869..1599277)
Genome browser
AA seq
802 aa
AA seq
DB search
MRRAEVFVNIPVKSIAKAYSYAVPDELSFLAAGWRVFVPFGGRRVEGFVVAVRENEGERT
DYELKPILSVVDEEAWFTSEMLETARRIADFYLCSPAEAMRLFMPGKSGLKIEVEYEAKE
GEEPPLTGAAQQVFRSLRENGVMQLSAFRKALPALAAEIPALLEKLVQQKYVRKLYRAQQ
RDKARYENILSLARPLDEAVLARYRRRRAQKRLLELLAAEGEKTDATLREAGFSAAVLRA
VLEEGDVKSEKRRALRDSYGDVTGVGAMVDLTAEQRTAVDAVLPYIGRREHRGFLLQGVT
GSGKTQVYIETAAAARREGRRVIVLVPEIALTSQIVLAFKGSFPEDIVVMHSQLSLAERN
DAIFRVRRGEAGIVIGARSALFTPIEDVGLIILDEEQDMSYKQDEAPRYHARPIAEVMAK
LHRAVLLLGSATPSLETSYRARCGEFTLLSMPERIGARPLAHVECVDMREELHRGNRTII
SAPLRQLIEETMAKKEQMILMLNRRGFSTFVMCRSCGAVVKCPSCSLPLVYHRSGKLLCH
HCDIEQAVPLLCPECSSPYIKYFGSGTEKLEAELKALVPTARVVRMDRDTTARKLAHQEI
LTAFREKRYDILLGTQMVAKGHDIPGVTAVGILSADASLNMPDFRAAERCFMLITQTAGR
AGRGEAAGQVVVQCYSPEHYAVQAALKQDYEAFYREEIAIREQLFYPPFSRLVKLIVQHG
EEEAARQEACRIQENFLVAFAGREGQQIIGPAPALIAQFRGIHRFVLLIKTADLAAVREF
LRGEGLDKRNDVLIDVDPIMTM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaagggcggaagtctttgtcaatattcccgtgaagagcatagcgaaggcgtacagc
tatgccgtgcctgacgagctgtctttccttgcggcgggctggcgcgtatttgtgcctttc
ggcgggcgcagggtcgagggcttcgtcgtcgctgttcgggagaatgaaggggagcggaca
gactacgagctgaagccgatcctctctgttgtcgacgaagaggcatggtttacgtccgag
atgctggaaacggcacgtcggatcgcggacttctacctgtgctcgcccgctgaggcgatg
cggctcttcatgccgggcaagagcggcttgaagatcgaggtcgaatatgaggcaaaagag
ggggaagagccgcctttgacgggagcggcgcagcaggtcttccgttctctccgtgaaaat
ggcgtcatgcagctttctgcttttcgcaaggcgcttcctgcgcttgccgccgagattccc
gccctcttggaaaagctcgtgcagcagaaatatgtgcgaaagctctatcgggcgcagcag
cgcgacaaggcgcgttatgagaatatcctgtcgctcgcgcgtccgctcgatgaggctgtg
ctcgcccgctatcgaaggcggcgtgcacagaagcgtctgttggagcttcttgccgcagag
ggggaaaagacggatgccaccctgcgcgaggcaggattttccgccgctgtccttcgcgcg
gtgctcgaagagggcgatgtgaagagcgagaagcggcgcgctctgcgcgacagctacggc
gatgtgacgggcgtcggggcgatggtcgacctgacggcggagcagaggacggctgtcgat
gccgtgcttccctacatcgggcggcgcgagcatcgcggcttcctcttgcagggcgtgacg
ggaagcggcaagacgcaggtctatatcgagacggcggcggccgcgcgcagggaagggcgc
agggtcatcgtgctcgtgcccgaaatcgccctgacgagccagatcgtcctcgccttcaag
ggatcttttcccgaggacatcgtcgtcatgcacagccagctttctcttgccgagcgaaac
gacgcgatcttccgcgtgcggcgcggggaggcgggcatcgtcatcggtgcacgctcggcg
ctctttacgcccatcgaggacgtcggactcatcatcctcgacgaggagcaggatatgtcc
tacaagcaggacgaggcgccgcgctaccatgcgcgtcccatcgccgaggtcatggcgaag
ctgcatcgcgccgtactgcttttgggcagcgctacgccgtctcttgagacttcgtaccgc
gcgcgctgcggcgagtttacgctcctttctatgccggagcgcatcggtgcgagaccactc
gcgcatgtcgaatgtgtagacatgcgcgaggaactgcatcgcggcaatcgcacgatcatc
tccgcacctctgcgtcaactcatcgaggaaacgatggcgaagaaggagcagatgatcctc
atgctgaaccgccgcggcttctcgaccttcgtcatgtgccgttcgtgcggcgctgtcgtc
aaatgtccttcctgctcgctgccgctcgtctatcatcgaagcggcaagctcctgtgccat
cactgtgacatcgagcaggccgtgccgctcctgtgccccgaatgttcgagtccctacatc
aaatactttggctcgggcacggaaaagctggaagcggaactcaaggcgctcgtgccgaca
gcacgcgtcgtgcgcatggacagggatacgacggcgcgaaagctcgcgcaccaagaaatc
ctcacagcgtttcgcgagaagaggtacgacatcctgctcggcacgcagatggtcgccaag
gggcatgacatcccgggcgttacggcggtcggcatcctcagcgccgatgcgagcctaaac
atgcctgactttcgcgcggcagagcgctgcttcatgctcatcacgcagacggcgggccgc
gcaggcaggggcgaggctgcgggacaagtcgtcgtgcagtgctacagccccgagcactat
gcggtgcaggcggcgctcaagcaggattacgaggccttttaccgcgaggagattgccata
cgcgagcagctcttttacccgccgttcagccgcctcgtcaagctcatcgtgcagcatggg
gaagaggaggcggcgcgtcaggaagcgtgccgcatccaggagaatttcctcgttgccttc
gcaggcagggaagggcagcagatcattggccctgcgcccgctctgatcgcccagtttcgc
ggcatccatcgcttcgtgcttctcatcaagacggcggatctcgccgcagtgagggagttc
ctgcgcggcgagggactggataagaggaacgatgtgctcatcgacgtcgatccgatcatg
acgatgtga
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