Selenomonas sputigena: Selsp_1463
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Entry
Selsp_1463 CDS
T01474
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssg
Selenomonas sputigena
Pathway
ssg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Selsp_1463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssg03021
]
Selsp_1463
03400 DNA repair and recombination proteins [BR:
ssg03400
]
Selsp_1463
Enzymes [BR:
ssg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Selsp_1463
Transcription machinery [BR:
ssg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Selsp_1463
DNA repair and recombination proteins [BR:
ssg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Selsp_1463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEC00420
UniProt:
C9LTF6
LinkDB
All DBs
Position
complement(1628380..1629339)
Genome browser
AA seq
319 aa
AA seq
DB search
MIEIEKPKIEIVEISEDNRYGKFVCEPLERGYGTTLGNSLRRILLSSLPGAAITSIRIDG
VLHEFSTIPGVRDDVTNIVLNLKSLCFKMYSEEPRVLRLDVKGEKEITAADIITDPDVEI
LNPDLHIATLNEDGELHMEMIVERGKGYVAAEKNKKPDHVIGVIPIDSIFSPIQRVNYTV
QDTRVGNVTDYDKLILDVWTDGSIRPEEGVSRAASILISHFKLFQNMAGIPEIEEEEEIA
PPEPEEPDASKVLETTIDDLDLSVRSFNCLKRANINTVADLVSKTEEDMMKVRNLGRKSL
EEVKKKLEEYDLTLKKEEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagatcgaaaagccaaagatcgagatagtggaaatcagcgaagataatcgttat
gggaagttcgtctgcgagcctttggagcgtggctacggcacgaccctcggcaacagcttg
cggcgcatcctcttgtcatccctgccgggcgctgcgatcacctcgatccgcatcgacggc
gtactgcacgagttctccaccattccgggcgtccgcgatgatgtgacgaacatcgtgctg
aacctcaagtcgctctgcttcaagatgtacagcgaagagccgcgcgttcttcgcctcgac
gtcaagggcgagaaggaaatcacggcggcggacatcattaccgatcccgacgtcgagatc
ttgaaccccgatcttcacatcgcgacgctcaacgaggacggagagctgcacatggaaatg
attgtcgagcgcggcaaaggctatgtggcagcggagaagaacaagaagcccgatcatgtc
atcggcgtcattccgatcgactccatcttttccccgatccagcgcgtcaactacaccgtg
caggatacgcgcgtgggcaacgtcaccgactatgacaagctcatcctcgacgtgtggacg
gatggatctatccgccccgaagagggcgtgagccgcgcggcgagcatcctcatctcgcac
ttcaagctcttccaaaacatggcgggcattccagagattgaggaagaggaggagattgct
cctcccgagcctgaggagccggatgcttccaaggttcttgagacgacgattgacgatctc
gacctctccgtgcgttccttcaactgcctgaagcgcgcgaacatcaacacggtcgcagat
cttgtctcgaagacggaagaagacatgatgaaggtcaggaacctcggcaggaaatccttg
gaagaagtcaagaagaagcttgaagagtacgacttgacattgaagaaagaagaagaataa
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