Selenomonas sputigena: Selsp_1508
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Entry
Selsp_1508 CDS
T01474
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
ssg
Selenomonas sputigena
Pathway
ssg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Selsp_1508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssg03021
]
Selsp_1508
Transcription machinery [BR:
ssg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Selsp_1508
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
MAM33
Motif
Other DBs
NCBI-ProteinID:
AEC00465
UniProt:
C9LTA9
LinkDB
All DBs
Position
complement(1657481..1658608)
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AA seq
375 aa
AA seq
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MAEKANKAALDVDKKPTQSSAIVSSLLTKGRGNGGVLTYGELMTALQEQELTPDEIDDLY
ETFSNKGIEIVDDSNRAQAEMDEDKAEEEVDIDLSIPEGISIDDPVRMYLKEIGRVPLLS
ADEEIALAKRMEAGDEEAQKELAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVE
KFDYNKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQQLGRE
PSPEEIAEAMEISVERVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDQDAPAPAEAASF
MLLKEQLEEVLDTLTEREERVLRLRFGLDDGRARTLEEVGQNFGVTRERIRQIEAKALRK
LRHPSRSRKLKDFLD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagcgaacaaggcggctctcgacgtggacaagaagccgacgcagagctct
gccatcgtgtcgagccttctcacaaaagggcggggcaacggcggcgtgctgacctacggc
gagctgatgacagcattgcaggagcaggaactcacgccggatgaaatcgacgacctttac
gagacgttcagcaacaagggcatcgaaattgtagatgattcgaaccgtgcacaagcggag
atggacgaggacaaggctgaggaagaggtggatatcgatctcagcattcccgagggaatc
agtatcgatgatcccgtgcgcatgtatctcaaggaaattggtcgtgtgcctctcctttcc
gcagatgaggaaatcgcccttgccaagcgcatggaagcgggcgatgaggaagcgcagaag
gaattggcagaggcgaatcttcgtctcgtcgtgagcattgccaagcgctatgtcggccgg
ggcatgctgttcctcgatctcatacaggagggcaatctcggcctcatcaaggcggtcgag
aagttcgactacaacaagggatacaagttcagtacctatgcgacgtggtggattcggcag
gcgatcacgcgcgccatcgccgatcaggcgcgtacgatccgcatccccgtgcacatggtc
gagacgatcaacaagctcattcgcgtttcgcgtcaactcttgcagcagcttggccgggag
ccgtcgcccgaagaaatcgccgaggcgatggaaatcagcgtggagcgcgtgcgcgagatc
atgaagattgcgcaggagccggtttccttggaaacgccgatcggcgaggaagaggactct
cacctcggcgacttcatcgaggatcaggacgcgcccgcgccggcggaggccgcatccttc
atgctcctcaaagaacagctcgaagaagtcctcgacaccttgacggagcgcgaggagcgc
gtcctgcgcctgcgcttcggtctggacgacggcagggcgcgcacgcttgaagaggtcgga
cagaacttcggcgtgacgcgcgagcgtatccgtcagatcgaggcgaaggctcttcgaaag
ctgcgtcatccgagccgcagccgcaagctgaaggactttctcgattga
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