Selenomonas sputigena: Selsp_1832
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Entry
Selsp_1832 CDS
T01474
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
ssg
Selenomonas sputigena
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Trypan_PARP
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
AEC00787
UniProt:
C9LS91
LinkDB
All DBs
Position
complement(2014930..2022219)
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AA seq
2429 aa
AA seq
DB search
MRKKARLKQLTLGIAAALLAGSWQVPAWAAEQGPIKEDTTLTADTEVKADKNTIKWNIVN
GASAVYANSSLTLDMAGHDLKLDIRNLKNENNRASGLHIRPNATLTVHSDKNNASAANRL
ITINAHGNWKDADQHGGATSGIRFDEYAKKPMKADIHADVQINELWAGREFARGIWAPGK
ATLNLDGTFTIKPGAVYHYWTEAGLGNVKSPSTYGIHVTGESNTLNIRRVDIDDPKIQRG
IQFGDEFNSAKDSVLRIGGGKLKIADNKARDQWLMWVKGSSKTYFNVNEAGTDAADQKTE
LAGPIHTENGGEVYLGLNGADSKWLGGTEAGATGKTTLFLKNGATWDTMNGGRGTRLARL
SSTNGNEGNIFQNDAGKLTIDDYAGRQKIYYSHTGGDGTDTSHYTAGDTHIKKAAANSFV
TMVTDRTNPAANEEQIHKTLNALAGKLYYDAAKSGEDHLTGRAMLAEGLTASSAEVKVER
MKFSATTGQGSTDGTPAAPLPPVTPPGTTPGQPSTPPASAVLDTTQQIAEVGFDSMDLSE
KWKNDGYGDDNGHYTFDKDVIIRTKASDNKVIPAQRYYTGGIVVDEEAPEGPVTVDMKAH
RLTLNSTADSDERYASGIVATAGNLEIKRAGGIDINITGSKRSEHGIYAMATSRRDGRIV
IENDDTAPHAVKIRNTSSGEKGNAITAKGASSRSALVDIKGLVDIEQDKENLLYASNDGE
IRIGGGRMMAGANAKAVHITRQGKVFINARSAGDGVDAASTERDVKVEGNVLLEGNGGVF
GAALNTEQSYIKGKIGSSGSGSTRLLLANGARWDNQSVGIGGDTIGRSHLTHLKSDGGAI
HQNDTQDLTIDKFEGKAKLFYKHESDGTDTAHYKAGDTHIKSAAENAEITVATDADRVNL
SDDAAVHKTLNALAGKLYYDAAATERHLKGKAMIAEGLTASSASKKLEDITFKANGQGSV
KEDIGEGRQIAEGDWKGAVREQKYWDKKGVRSGSTYSFSNDAAFSPKLSDNPVKALNEYS
RYDFGGILWGKGKNGSIHMNGHALNIDTGVGNVRTQSGERRGDESTGILVNGGTLELKSL
GKTTIQAHNNGIHLVGDQRKGNANLYIKNQADADHAVKIMSKDKGIYLESYNGAARLEID
GMVDIDAPKGVVVDGGTLTIGGGRIVSKGDAALYVNSPGTAKINATMDGEGNVVPMHENR
DVQIEGDIQVKAGSASAYIGLTTKNSILKGLFTTDMYTWPQNNWELASGNGYLVLKNGGT
WEHTKFGTGRDKNGTAELGDSRVSRLNADGGIIRQKDKRNILIDDFRGNMKVMYEHENDG
SKAADYKAGDVKIAAAKQGSEVTMVTDSKNITTSDEAQVRSVLDALAGKLYYDGARSGLR
NLKGKAMIAEGLTASSISKRLADISFRSDSGQGYTNDTIENGNYKNFHGLNTGIDRNDYK
PLTFDNFSGSARLYYKHVNDGTQTEDYGSDPAHKDPNKFYGDTHIKHAAANSSVTMVTDS
NGVNLGDETAVRKTLNALAGKLYYDGYVNGERNLKGKAMIAEGLTGSAVSQQMDLDYWLS
NGRAHVKPKDTTPLTGETIKKQIAEGNFDTNDTKAYWKGKGVYDGKGNYTFHRDIKLEVK
AADKPVTSARDNKFGTIYWNGDVEGSIDMTGHRLDIKAGPGGHGLLPNEGPQAGWERTPN
AITVYSGTLTIKNVKGMNIESDPKGSLYGRGIFVMGYPGGPGHMSGHGKAKLVIENDDKM
ENAVKIRVKNTGEDFGAIEARKNMGSAEVDIKGLVDIDSTMWRAIESHGARISIGGGIIK
GTDVASIAAYDRGTVFVNSKFDGNGNVVATSNTRPVQITGDISSEGDGHIVLGLNNKNSF
FKGMVSTDINGIDKQTQKWRYNPGNVSMLLANGAIWEHKQVGTGYHHKKETGSREKGIAM
DSRVTRLQADKGILKQNDPHKITIDNYSGNMQLVYQHEGDGTKAEHYKAGDVHIKKAAEN
SSVTMVTDSNGLTLTDETQVYKTLNALAGKLYYDGYKTGERNLKGEAMISEGLVASSKTL
KKANMDWSEASGQGSVKAPQPQPKPEPQPQPEPQPQPQPQPQPKPEPQPKPEPQPQPQPK
PQPKPEPQPKPEPKPQPKPKIEYGDYETKLMSGVKSAMTASTMAWRAEANDLMKRMGDLR
LSPEDEGVWARVYRGKSSSDKDKTNFEMNYTTIQVGYDKKVGDDWRVGVAGSYMKGTSSF
AKGNGENKEGNLGIYGTWSGKNGEYVDLIAKIGRLSNEYTVYNDFNHYVKGDFHTWGGSL
SAEYGRRINLNGGSFVEPQIELIYSHLNGVNYTGDTDYAGQKMYVRQGAMNSFVGRIGLG
FGQETKSSTWFLKASLYHEFAGDLSTDYSDGTNPWKTTHQEGKDTWLGLQLGGTMKLSDK
TSLYGTFEKTFGGDIKTDWRVDAGLRWSF
NT seq
7290 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaaaagcgcgtctgaagcaactgactttaggcattgccgcagccttgctggca
ggctcatggcaagtgccggcgtgggcggcagagcagggaccgatcaaggaagatacgacg
ctgacggcggataccgaggtcaaggcagataagaatacgatcaagtggaatattgtgaat
ggcgcatcggctgtttatgcgaacagctcgcttacgctcgatatggcagggcacgatctc
aaactggatattcgcaatctaaagaatgagaataatcgcgcctcgggacttcatattcgc
cctaatgcaacgttaactgttcatagcgataagaacaatgccagtgcggcaaaccgtctc
atcaccatcaatgcccatggaaactggaaggatgccgatcagcatggcggtgcgacaagc
ggcattcggttcgacgaatatgcaaaaaaaccgatgaaagcggatatccatgcagatgtg
cagatcaatgagctttgggcaggcagagaatttgcccgcggcatttgggcgccgggtaaa
gcgacgctcaatctggatggcacgttcacgataaaaccgggagccgtctaccattattgg
acggaagccggactggggaacgtgaaatcaccgagtacgtatggtattcatgtgacagga
gagagtaatacgctgaatattcgtcgcgtggatattgacgatccgaagatccagcgcggc
attcagtttggtgatgaattcaattctgctaaagacagcgttctgcgcatcggcggcggc
aagctgaagattgccgacaacaaggcgcgcgatcaatggttgatgtgggtgaagggatcg
agcaaaacctatttcaatgtgaatgaggcgggcaccgatgctgcggatcaaaagacggag
ctggcaggtcccattcatacggaaaacggcggcgaagtctacctcggccttaatggagcg
gattccaaatggctcggcggtacggaagctggcgcaacgggaaagacgacgctctttttg
aagaacggcgcgacgtgggatacgatgaacggcgggcgcggcacgcggcttgcccgactc
tcaagcacgaatggcaatgagggaaacattttccaaaatgatgcaggcaagctgacgatt
gacgactatgcgggtcggcaaaagatctactacagtcatacgggcggcgacggcacagac
acatcgcactacacggcaggtgatacgcacatcaaaaaggcggcggcgaactctttcgtc
acgatggtgacggaccgcacaaatcctgcagcgaatgaagaacagattcataaaacgctc
aacgcactcgcaggtaagctctactacgatgcagcaaagagcggggaagaccatctcacg
ggtcgggcaatgctcgcggaaggcttgacggcatcttcggcagaagtcaaggtcgagcgc
atgaagttctctgcgacgactgggcaaggcagcacggacggtacgcccgctgctcccttg
ccgcctgttacgccgccaggcacgacgcctggacagccatctacgccgcccgcttctgcc
gtgctggatacgacgcagcagattgcagaagtcggttttgacagcatggatctgagcgag
aagtggaagaatgatggctacggcgatgacaacgggcactatacctttgacaaggacgtc
atcattcgcacgaaggcgagcgacaacaaggtgatccctgcgcagcgatattatacgggc
ggtatcgtggttgatgaggaggctcctgaagggcctgtcactgtcgatatgaaggctcat
aggctgacgctgaacagtacggcggactcggatgaaagatatgcgagcggtatcgtggcg
actgccggaaatctggaaatcaagcgtgcgggcggcatcgatatcaatattacgggcagc
aagcgctcagaacacggcatctatgccatggcaaccagtcgcagagatggccgtatcgtc
atagaaaacgacgatacagcaccgcatgcagttaagattcgcaatacatcgagcggggaa
aaaggcaacgccatcacggcaaaaggtgcatcatcgagaagcgccctcgtcgacatcaag
gggcttgtcgatatcgagcaggataaggaaaatcttctctatgcctcgaatgacggcgaa
atccgtatcggcggcggacgcatgatggccggagcgaatgcgaaagccgtgcatatcacg
aggcaaggcaaggtattcatcaatgcgagaagcgccggtgacggcgttgacgctgcttcg
acggagcgcgatgtcaaggtcgaaggcaacgtgttgcttgagggcaatggcggcgtcttc
ggtgcagcgctcaatacggaacagtcctacatcaagggaaagattggcagctcgggcagc
gggagtactcgtcttctgctggcaaatggtgcgcgttgggataatcagtcggtcggtatc
ggcggcgatacgattggcaggagtcatttgacacatttgaagtcggacggcggcgcgatt
caccagaatgatacgcaggatctcaccattgacaagttcgaaggcaaagcaaagctgttc
tataagcatgaaagcgacggcacggacaccgcccattacaaagcgggcgacacgcatatc
aagagtgcggcggaaaatgctgaaatcacggtcgccacagatgctgatcgtgtgaatctg
tcggacgatgctgcggtccataagacgctgaacgcgcttgcgggcaagctctactacgat
gctgccgctaccgagcgccatctcaagggcaaggcaatgatcgccgaaggactgactgct
tcatcggcgtcgaagaagttggaggatatcaccttcaaagcaaatggacagggaagcgtc
aaggaagatatcggcgaaggacgtcagattgcggagggcgactggaaaggtgcagtccgt
gagcagaagtattgggacaagaagggcgttcgcagcggctcgacctacagcttcagcaac
gacgctgcattttctcccaagctcagcgacaatcccgtcaaggcgctgaacgagtacagc
cgctatgatttcggtggtatcttgtggggcaaaggaaagaacggcagtatccatatgaat
gggcatgcgctgaatattgataccggagtcggcaatgtccgtacgcaatcgggagagcgt
cgcggcgacgagtccaccggcattctggtgaacggtggtacgcttgagctgaagtcgctc
ggcaagacgacgattcaggcgcacaacaacggcatccatctggtaggtgatcagaggaag
gggaatgcgaacctctatatcaagaatcaggcagatgcagatcatgccgtgaaaattatg
tctaaggacaagggcatctatctcgaaagctacaacggcgctgcgcggttggaaatcgac
ggcatggtcgatattgatgcaccgaaaggcgtggtcgtcgatggaggcacgctcaccatc
ggcggcggcagaatcgtctcgaagggtgatgcggcgctttatgtaaactcgcccggtacg
gcaaagatcaatgcgacgatggatggtgaaggtaacgtcgtccccatgcacgagaatcgc
gatgtgcagattgagggcgatatacaggtgaaagcaggatctgcctccgcttatatcggt
ctgacgacgaagaattccatcctcaagggactctttactaccgatatgtacacatggcca
cagaataattgggaattggcgtcgggcaatggctatctcgttctcaagaacggtggtacg
tgggaacatacgaagttcggcacgggcagggataagaatggtacggcggagctgggcgac
agccgtgtcagccgccttaatgccgacggcggcatcatccgccagaaggacaagcgcaac
atcctcatcgacgacttccgcggcaatatgaaggtgatgtacgagcatgagaacgacggt
tcgaaagcagcggactacaaagcgggcgatgtcaagattgcggcggcaaagcaaggctcc
gaggtcacgatggtcacggacagcaagaacatcacaacatcggacgaagcgcaagtccga
agcgtgctggatgcactcgcaggcaagctctattatgatggtgcaagatccggtctgcga
aacctcaagggcaaggcgatgattgctgagggactgacggcatcgtcaatttcgaagcgg
ctggcagatatatccttccgttcggacagtggccaggggtatacgaatgataccatagag
aatgggaactacaagaatttccacggtctgaataccggcattgaccgcaacgactataag
ccgcttacgtttgataatttctccggcagtgcacgactctactacaagcatgtcaatgac
ggcacgcagacggaggactatggcagcgatccggcccataaagatcccaacaagttctac
ggcgatacacatatcaagcatgctgccgcgaactcttcggtcacgatggtgacggacagc
aacggtgtcaatctcggcgatgagactgcggtgcgcaagacgctcaatgcgcttgcaggc
aagctgtattacgatggttacgtcaatggtgagcgcaatctcaagggcaaggcgatgatc
gctgaagggctgacgggatctgccgtttcgcagcagatggatctcgactactggctgtca
aacgggcgcgctcatgtaaagcccaaagatacaactcctttgacgggtgaaacgattaag
aagcaaattgccgaaggcaatttcgatacgaacgataccaaggcatattggaaaggcaag
ggcgtttacgacggcaaggggaactataccttccatcgcgacatcaagcttgaggtaaag
gcggcggataagcccgtcacttcggcgagggacaataagttcgggacgatctattggaac
ggcgacgttgaaggttcgattgatatgacggggcatcgcctcgacatcaaggcaggtccc
ggcggtcatggccttctgccgaacgaaggcccgcaggcaggctgggagcgcacgccgaat
gccatcaccgtctacagcggcacgcttacgatcaagaatgtcaagggcatgaatatcgag
tcggatccgaagggcagtctctacggacgcggcatcttcgtcatgggttatccgggcggt
ccgggacacatgagcggtcatggaaaagcaaagcttgtgattgagaacgacgacaagatg
gaaaatgccgtcaaaatccgcgtgaagaatacaggtgaggatttcggtgcgatcgaagct
cgcaagaatatgggcagcgcggaggtcgatatcaagggactcgtggacatcgactcgacg
atgtggcgtgcgattgagtcgcatggtgcgagaatctccatcggcggcggcattatcaag
ggtactgatgtcgcgtccatcgctgcttatgaccgtggcacagtattcgtcaattctaag
tttgatgggaatggcaatgtggtcgcgacttcgaatacgcgtcctgtacagattacgggc
gatatcagctcggagggcgatggtcatatcgtcttgggattgaataataagaattccttc
ttcaagggaatggtatcgactgacatcaatgggattgacaagcagacgcagaaatggcgc
tacaaccccggcaatgtttccatgctgctcgccaacggtgcaatatgggaacataagcag
gtcggcactggctatcatcacaagaaggaaaccggctctagagaaaagggcattgctatg
gatagccgcgtcactcgtctgcaggcagacaagggcatcttgaagcagaacgatccgcac
aagatcacgattgacaactactccggcaatatgcagctcgtctatcagcatgaaggcgac
ggcacgaaagccgagcactataaggcgggcgatgtgcatatcaagaaagcggcggagaat
tcttcggtcacgatggtgacggacagcaacggtcttacgttgacggacgagacgcaagtc
tacaagacgctcaatgcactcgcaggaaagctctactacgacggatataagacgggggag
aggaatctcaaaggcgaggcgatgatctctgaaggtctggtcgcctcatccaagacgctg
aaaaaggcaaatatggattggtcggaagcgagcggtcaaggttcggtaaaggctccgcag
ccacagccgaagccagagccgcagccacagccagagccgcagccgcagccacagccacag
ccacagccgaagccagagccgcagccgaagccagagccgcagccacagccacagccgaag
ccgcagccgaagccagagccgcagccgaagccagagccgaaaccgcagccgaagccgaaa
attgagtatggcgactacgagacgaaactcatgagcggcgtcaagtcggcgatgacggca
tcgacgatggcgtggcgtgccgaggcgaacgaccttatgaagcgcatgggcgatctcaga
ctttcgccagaagatgagggcgtttgggcgcgtgtctaccgcggcaagtcgtcgagcgac
aaggacaagacgaacttcgagatgaactacacgacgatccaggtcggttacgacaagaag
gttggagacgactggcgtgtcggcgttgctggaagctacatgaagggaacatcttccttt
gcaaaaggcaatggcgaaaacaaggaaggcaacctcggcatttatggcacatggtcgggc
aagaacggcgaatatgtcgatctcattgcaaagatcggcagactctctaatgagtacacg
gtctacaacgacttcaatcactatgtcaagggcgacttccacacctggggcggttcactc
tcggcagagtacggcagacgtatcaacctgaatggcggcagtttcgtcgagccgcagatc
gagctgatctacagccatctgaacggtgtcaactacacgggtgatacggactatgccgga
cagaagatgtatgtacgccaaggcgcgatgaacagcttcgtcgggcgcattggtcttggc
ttcggtcaagaaacgaagagcagcacatggttcctcaaagcgtcgctctatcatgaattc
gcgggcgatctctcgacggattactctgacgggacgaatccgtggaaaacgacgcatcaa
gaaggaaaggatacatggcttggtctccagctcggcggcacgatgaagctcagtgacaaa
acgagcctctatggcacatttgaaaagacattcggcggcgacatcaagactgattggcgc
gtcgacgcaggccttcgctggagtttctaa
DBGET
integrated database retrieval system
