Staphylococcus schweitzeri: NCTC13712_00107
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Entry
NCTC13712_00107 CDS
T06947
Symbol
capD_1
Name
(GenBank) UDP-glucose 4-epimerase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
ssh
Staphylococcus schweitzeri
Pathway
ssh00541
Biosynthesis of various nucleotide sugars
ssh00552
Teichoic acid biosynthesis
ssh01100
Metabolic pathways
ssh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ssh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC13712_00107 (capD_1)
00552 Teichoic acid biosynthesis
NCTC13712_00107 (capD_1)
Enzymes [BR:
ssh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
NCTC13712_00107 (capD_1)
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Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_10
NAD_binding_4
KR
adh_short
TrkA_N
GFO_IDH_MocA
OLD-like_TOPRIM_1
Tmemb_170
DUF3842
MM_CoA_mutase
Motif
Other DBs
NCBI-ProteinID:
VEE64735
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Position
1:122630..124453
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AA seq
607 aa
AA seq
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MAHLSVKLRLLILALIDSLIVTFSVFVSYYILEPYFKTYSVKLLILAAISLFISHHISAF
IFNMYHRAWEYASVSELILIVKAVTTSIVITMVVVTIVTGNRPFFRLYLITWMMHLILIG
GSRLFWRIYRKYLGGKSFNKKPTLVVGAGQAGSMLIRQMLKSDEMKLEPVLAVDDDEHKR
NITITEGVKVQGKIADIPELVKKYKIKKIIIAIPTIEQERLKEINNICHLDGVELLKMPN
IEDVMSGELEVNQLKKVEVEDLLGRDPVELDMDMISKELTNKTILVTGAGGSIGSEICRQ
VCNFYPERIILLGHGENSIYLINRELRNRFGKHFDIVPVIADVQNRARMFEVMDQYKPYA
VYHAAAHKHVPLMEYNPEEAVRNNILGTKNTAEAAKHAGVKKFVMISTDKAVNPPNVMGA
SKRIAEMIIQSLNDETHRTDFVAVRFGNVLGSRGSVIPLFKSQIEAGGPVTVTHPEMTRY
FMTIPEASRLVLQAGALAEGGEVFVLDMGEPVKIVDLARNLIKLSGKKEEDIRITYSGIR
PGEKMFEELMNKDEIHPEQVYEKIYRGKVKHMTSDEVDEIIQDIVTDFSKEKIINYANGK
KGDNYVR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcacatttatctgtgaaattgcggcttttaatactagcgttaatcgattcactgata
gtgacattttcagtgttcgttagttattacattttagaaccgtatttcaaaacatattct
gtcaaattattaatattggcagctatttcactattcatatcacatcatatttcagcattt
atatttaatatgtaccatcgtgcatgggaatatgccagtgtgagtgaattgattttaatt
gttaaagctgtgacgacatctatcgttattacgatggtggtcgtgacaattgttacaggc
aatagaccattttttaggctgtatttaattacttggatgatgcacttgattttaataggt
ggctcgcgtctcttttggcgaatttaccgaaaatatcttggaggtaaatcatttaataaa
aaacctactctagttgttggcgcaggtcaagcgggatcgatgctgattagacaaatgttg
aaaagtgacgaaatgaaacttgaaccagtattagcagttgatgatgatgaacataaacgt
aatatcactattacagaaggtgttaaagttcaagggaagatagcagatataccagaacta
gtgaaaaaatataagattaaaaaaataattatcgccattccgacaattgagcaagagcgt
ttgaaagagattaataatatttgtcatttagacggtgttgaattattgaaaatgcctaac
attgaagacgtcatgtctggtgaattagaagtaaatcaattgaaaaaagttgaagtagaa
gatttgttaggtcgagacccagttgaattagatatggatatgatatcaaaagaattaacg
aataaaactattctagtgactggtgcaggtggttcgattggatctgaaatatgcaggcaa
gtatgtaatttttatccggaacgaattattttgcttggacatggtgaaaacagtatttat
ttaattaatcgagaattacgtaatcgttttggaaaacactttgatattgtgcctgttatt
gcagacgttcaaaatagagcgcgcatgtttgaagtaatggatcaatataaaccatatgca
gtttatcacgcagcggcacataaacacgtaccgttaatggaatataatcctgaagaagca
gttcgtaataatattttagggacaaaaaataccgcagaagcagcaaagcatgcaggtgta
aagaaattcgtgatgatttccaccgacaaagcagttaacccacctaatgttatgggtgct
tcaaaacgtattgcagaaatgattattcaaagcttaaacgatgaaacgcatcgaacagat
tttgttgcagtaagatttggtaatgtacttggttcgagaggatctgtaattccgcttttc
aaaagtcaaattgaagcaggtggtccagttacagtaacacatcctgagatgacaagatat
tttatgacgatacccgaagcttctagattagttttacaagcaggtgcacttgcagaaggt
ggagaggtatttgtgttagacatgggtgaaccagttaaaattgtagatttagcccgtaac
ttaattaagctaagtggtaaaaaagaagaagatatacgtatcacatattcgggtattaga
cctggcgaaaaaatgtttgaagagttaatgaacaaggatgaaattcatccggaacaagta
tatgaaaaaatttatcgcggcaaagtaaagcatatgacaagtgatgaggttgatgaaatt
attcaagatattgtcaccgattttagtaaagaaaaaattattaactatgccaatggcaaa
aagggagataattatgttcgataa
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