Staphylococcus schweitzeri: NCTC13712_01216
Help
Entry
NCTC13712_01216 CDS
T06947
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssh
Staphylococcus schweitzeri
Brite
KEGG Orthology (KO) [BR:
ssh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssh03016
]
NCTC13712_01216 (truB)
Enzymes [BR:
ssh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC13712_01216 (truB)
Transfer RNA biogenesis [BR:
ssh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC13712_01216 (truB)
Prokaryotic type
NCTC13712_01216 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5563
Serine_rich
Motif
Other DBs
NCBI-ProteinID:
VEE65796
LinkDB
All DBs
Position
1:1270135..1271052
Genome browser
AA seq
305 aa
AA seq
DB search
MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYV
MDMGKAYEATVSIGRSTTTEDQTGDTLEVKAIHSAHITNDDIDRLLEDFKGIIEQTPPMY
SSVKVNGKKLYEYARNNETVVRPKRKVNINDIGRISELDFKGNECHFKIQVVCGKGTYIR
TLATDIGAKLGFPAHMSKLTRIESGGFKLQDSLTLEQIIALHEQDSLQNKLFPLEYGLKG
LPSIKIKNPHIKKRILNGQKFNKNEFDNKIKDQIVFIDDDSEKVLAIYMAHPTKESEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataatggaattttaccagtttataaagaacgaggattaacaagtcatgatgtcgta
ttcaaattacgtaaaattttaaaaactaaaaaaattggtcacacaggtacgcttgatccg
gaagttgctggcgtgttaccagtatgtattggcaatgctactagagtaagtgattatgta
atggatatgggcaaggcatatgaagctactgtttcaatcggaagaagtactactactgaa
gatcaaactggcgatacattagaagttaaagctatccattcagcgcacatcactaatgat
gacattgatcgattattagaagactttaaagggattattgaacaaacgcctccaatgtat
tcatcagtaaaagttaatggtaaaaaattatacgagtatgcgcgtaacaatgaaacagta
gtacgtcctaagcgaaaagtgaatattaatgacattgggagaatttctgaactcgacttc
aaaggaaatgaatgtcattttaaaatacaagtcgtttgtggtaaaggaacatatataagg
acgttagcaacagatattggtgcgaaattaggatttccagctcatatgtcaaaattaacg
cgaattgaatcaggtggctttaaattacaagatagtttaactttagaacaaataattgcg
cttcatgagcaggattcattgcaaaataaattgtttcctttagaatatggattaaagggt
ttgccaagcattaaaattaaaaatccgcacataaagaaacgtattttaaatgggcagaaa
tttaataaaaatgaatttgataacaaaattaaagaccaaattgtatttattgatgatgat
tcagaaaaagtattagcaatttatatggcacatcctactaaagaatcagaaatcaagcct
aaaaaagtctttaattaa
DBGET
integrated database retrieval system
