KEGG   Staphylococcus schweitzeri: NCTC13712_01249
Entry
NCTC13712_01249   CDS       T06947                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
ssh  Staphylococcus schweitzeri
Pathway
ssh02024  Quorum sensing
ssh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC13712_01249 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NCTC13712_01249 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssh03019]
    NCTC13712_01249 (hfq)
   03036 Chromosome and associated proteins [BR:ssh03036]
    NCTC13712_01249 (hfq)
Messenger RNA biogenesis [BR:ssh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     NCTC13712_01249 (hfq)
Chromosome and associated proteins [BR:ssh03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    NCTC13712_01249 (hfq)
SSDB
Motif
Pfam: Hfq DUF4809 Hfq_1 MBG LSM
Other DBs
NCBI-ProteinID: VEE65828
LinkDB
Position
1:1310092..1310325
AA seq 77 aa
MIANENIQDKALENFKVNQTEVTVFFLNGFQMKGVIEEFDKYVVSLNSQGKQHLIYKHAI
STYTVESEAQASTNSEE
NT seq 234 nt   +upstreamnt  +downstreamnt
atgattgcaaatgaaaacatccaagacaaagcactagagaattttaaagtaaaccaaact
gaagtaacggtattctttctaaacggtttccaaatgaaaggtgtaattgaagaattcgac
aagtatgtcgtaagcttaaattctcaaggcaaacaacacttgatttacaaacatgcgatc
agcacttacacagtagaatctgaagctcaagcgtctactaatagtgaagaataa

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