Staphylococcus schweitzeri: NCTC13712_01925
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Entry
NCTC13712_01925 CDS
T06947
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssh
Staphylococcus schweitzeri
Pathway
ssh03420
Nucleotide excision repair
ssh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13712_01925 (pcrA)
03430 Mismatch repair
NCTC13712_01925 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssh03400
]
NCTC13712_01925 (pcrA)
Enzymes [BR:
ssh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13712_01925 (pcrA)
DNA repair and recombination proteins [BR:
ssh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13712_01925 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC13712_01925 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
GBS_Bsp-like
Motif
Other DBs
NCBI-ProteinID:
VEE66446
LinkDB
All DBs
Position
1:complement(1997930..2000122)
Genome browser
AA seq
730 aa
AA seq
DB search
MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITF
TNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPEDAQKEATDYHSQMVATVYSGYQRQL
SRNEALDFDDLIMTTINLFERVPDVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKTILNAANEVIKNNS
ERKPKGLWTANTNGEKIHYYEAMTERDETEYVVREIMKHQRNGKKYQDMAILYRTNAQSR
VLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRMIANSNDDISLQRIINVPKRGVGPS
SVEKIQNYALQNNISMFDALGEADFIGLSKKVTQECLNFYELIQNLIKEQDFLEIHEIVD
EVLKKSGYRDMLERENTLESRSRLENIDEFMSVPQDYEENTPLEEQSLINFLTDLSLVAD
IDEADTENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSDDDHEMQEERRICYVA
ITRAEEILYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSTSKRQTIQPKSTPFAKR
GFSQRTTSTKKQVTSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLA
QFAPIEKKED
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgttattaaatcatatgaatacagaacaaagtgaagctgtaaaaacaacagaa
ggaccattgttaattatggcaggtgctggttcaggaaagacacgtgttttaacacatcga
attgcttatttattagacgaaaaagatgtctcaccttacaacgttttagcaattactttt
actaataaagctgcaagagagatgaaagaacgtgttcaaaaattagttggcgatcaagca
gaagtgatttggatgtctacatttcactctatgtgtgttcgtattttacgtcgtgatgcg
gatcgtattggtattgagcgtaattttacgataattgatcctactgaccaaaagtctgtt
attaaagatgttttgaaaaatgaaaatattgatagtaaaaagttcgagccacgtatgttt
attggagcaatcagtaatttgaaaaatgaacttaaaacaccggaagatgctcaaaaagaa
gcaactgattaccattcacaaatggttgctacagtttatagtgggtatcagcgacaatta
tcgcgtaatgaagcattagattttgatgatttaatcatgacaactattaatttattcgaa
cgtgtaccagatgtattagaatattaccaaaataaattccagtatatacatgtagatgaa
taccaagatacgaataaagcacaatacacattagttaagttattagctagtaaatttaaa
aatttatgtgttgtaggtgattcggatcaatcaatctatggctggcgtggtgctgatatt
caaaatattttatcctttgaagaagattatccagaagcgaaaacaatctttttagagcaa
aattaccgttcaacaaagacaattttaaatgcggcaaatgaagtaattaaaaataattct
gagcgtaagccaaaagggctatggactgcgaatacaaatggtgagaaaattcattattat
gaagcaatgactgaacgtgatgaaacggaatatgttgtacgtgaaattatgaaacatcag
cgtaatggcaagaaatatcaagatatggcaatcttatatagaacgaatgctcaatcacgt
gtgcttgaagaaacatttatgaaatcgaatattccatacactatggttggtggtcaaaag
ttctatgatcgtaaagaaatcaaagatttacttagttacttgcgtatgatagccaacagt
aacgatgacataagtttgcaacgtattataaacgtcccaaaacgtggtgtcgggccttca
tcggttgaaaagattcaaaattatgcacttcaaaataatatcagtatgttcgatgcactt
ggtgaagctgattttattggattatctaagaaggtgacacaagagtgtcttaatttttac
gaattaattcagaatttgataaaagaacaagattttttagaaattcatgaaatcgttgat
gaagttttaaaaaaatcaggatatcgagacatgcttgaacgtgaaaatacactagaatct
cgaagtagattagaaaacatcgatgaatttatgtcagttccacaagactatgaagaaaat
acaccattagaagaacaatcacttattaactttttaacagatttatcattagttgcagat
attgatgaagcggacactgaaaatggtgttactttaatgactatgcactctgcaaaaggt
cttgaatttccaatagtctttataatgggtatggaagaatcattattcccacacataaga
gctattaaaagtgacgatgatcatgaaatgcaagaagagcgacgtatttgttatgtggca
ataactagagcagaagaaatattatatatcacacatgcgacatctagaatgttatttggt
cgtccacagtcaaatatgccatcaaggtttttaaaagagattccagaatcattattagaa
aatcattcaacttcaaaacgacaaacgattcaaccaaaatctacaccatttgcgaaacgg
gggtttagtcaacgaacaacatcaacgaaaaaacaagtgacgtcatctgattggaacgta
ggtgacaaagtgatgcataaagcatggggagaaggtatggtaagtaacgtaaatgaaaaa
aatggttctattgaactggatattatttttaaatcacaaggaccaaaacgtttactagca
caatttgccccaattgaaaaaaaggaggattaa
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