Staphylococcus schweitzeri: NCTC13712_02054
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Entry
NCTC13712_02054 CDS
T06947
Symbol
glyA
Name
(GenBank) Pyridoxal-phosphate-dependent serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ssh
Staphylococcus schweitzeri
Pathway
ssh00260
Glycine, serine and threonine metabolism
ssh00460
Cyanoamino acid metabolism
ssh00630
Glyoxylate and dicarboxylate metabolism
ssh00670
One carbon pool by folate
ssh00680
Methane metabolism
ssh01100
Metabolic pathways
ssh01110
Biosynthesis of secondary metabolites
ssh01120
Microbial metabolism in diverse environments
ssh01200
Carbon metabolism
ssh01230
Biosynthesis of amino acids
ssh01240
Biosynthesis of cofactors
ssh04981
Folate transport and metabolism
Module
ssh_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ssh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC13712_02054 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NCTC13712_02054 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC13712_02054 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NCTC13712_02054 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NCTC13712_02054 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NCTC13712_02054 (glyA)
Enzymes [BR:
ssh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NCTC13712_02054 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
VEE66568
LinkDB
All DBs
Position
1:complement(2131443..2132681)
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AA seq
412 aa
AA seq
DB search
MSYITKQDKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEFVDVTESIAIDCAKALFGAEHVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHG
GHLTHGASVNFSGKFYNFVEYGVDKDTELINYDEVRKLALKHKPKLIVAGASAYSRTIDF
KKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEFADFVTTTTHKTLRGPRGGMILCKE
EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALDNNFKTYQEQVIKNAKVLADTLIKEG
FRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLG
TPAATTRGFDEKAFEEVAKIISLALKNSKDEEKLQQAKERVAKLTAEYPLYQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatatcaccaaacaggataaagttatcgcagaagcaatcgagagagaatttcag
agacaaaacagcaacattgagttaatcgcatcagaaaattttgtatcggaagcagttatg
gaagcacaaggttcagtattaactaataaatatgctgaaggctatccaggacgccgatat
tatggtggttgtgagtttgtagatgttactgagagcattgctatcgattgtgccaaagcg
ctatttggagctgaacatgtaaatgttcaaccacactcaggatcacaagcaaatatggca
gtttaccttgttgctctagaaatgggagacacagttttaggtatgaatttaagccatggt
ggccatttaacacatggtgcttcagtaaactttagtggtaaattctacaattttgttgaa
tacggtgtggataaagatactgaacttatcaattatgatgaagttcgtaaattagcactg
aaacataagcctaaacttatcgtggctggtgcatcagcttattcaagaacaattgatttt
aaaaagttcaaagaaattgcagatgaagtaaacgctaagttaatggtagacatggcacat
atcgcaggtttagtagcggcaggattgcatccgaatccagtagaatttgccgattttgta
acaactacaacacataaaacattacgtggaccacgtggtggtatgattttatgtaaggaa
gaatataaaaaagacatagataaaacaatcttccctggtattcaaggtggacctcttgaa
catgttattgcagcaaaagcagttgcatttggtgaagcactagataataatttcaaaaca
tatcaagagcaagtgattaaaaatgcaaaagttcttgctgatactttgattaaagaagga
tttagaatagtttctggtggtacagataatcatttagtagctgttgatgtaaaagggtct
ataggacttactggtaaagaagctgaagaaacattagattcagttggtatcacatgtaac
aaaaataccattccgtttgatcaggaaaaaccttttgtaacgagtggtatacgtttaggt
acacccgctgcaacaacgcgtggatttgatgaaaaagcatttgaggaagttgcgaaaatc
atcagtttagctttgaaaaatagtaaagatgaagaaaaattacaacaagcaaaagaacgc
gttgctaaattaacagctgaatatcctctatatcaataa
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