Staphylococcus schweitzeri: NCTC13712_02062
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Entry
NCTC13712_02062 CDS
T06947
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ssh
Staphylococcus schweitzeri
Pathway
ssh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13712_02062 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssh03021
]
NCTC13712_02062 (rho)
03019 Messenger RNA biogenesis [BR:
ssh03019
]
NCTC13712_02062 (rho)
Transcription machinery [BR:
ssh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NCTC13712_02062 (rho)
Messenger RNA biogenesis [BR:
ssh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC13712_02062 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
Mor
AAA
AAA_25
Spore_III_AA
YopJ_bacilli
Motif
Other DBs
NCBI-ProteinID:
VEE66576
LinkDB
All DBs
Position
1:complement(2138139..2139455)
Genome browser
AA seq
438 aa
AA seq
DB search
MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERILLETETKNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDLERSVEAAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKSELDTLWQLRNLFTDSTDFTERFIRKLKKSKNNEDFF
KQLQKSAEESTKTGRPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagagaacgtacatctcctcagtatgaatcattccacgaattgtacaagaac
tatactaccaaggaactcactcagaaagctaaaactcttaagttaacaaactatagtaaa
ctaaataaaaaagaacttgtcctagctattatggaagcgcaaatggaaaaagatggtaac
tattatatggaaggtatcttagatgatattcaaccagatggttatggcttcttaaggacg
gttaactactctaaaggggaaaaagatatttatatatcagctagtcagattcgtcgtttt
gaaattaaacgtggcgataaggtgacagggaaagttagaaagcctaaagataatgaaaaa
tattatggcttattacaagttgattttgtcaatgatcacaacgcggaagaagttaagaag
cgtccacacttccaagcattaacgccattgtatccagatgaacgaattttattagagaca
gaaacgaaaaattattcaacacgtataatggatttagtaacaccgatcggtctaggtcaa
cgtggtttaattgtagcgcctcctaaagcaggtaaaacgtcgttattaaaagaaattgca
aatgcaattagtacaaataaaccagatgcaaaattatttatattacttgttggtgaacgt
cctgaagaggtaacggacttagaacgttcagtagaagcagctgaagttgtacattcgaca
tttgatgaaccaccagaacatcacgttaaagtagctgaattattacttgaacgtgcaaaa
cgtttagtagaaattggtgaggatgtcatcattttaatggattctataacaagattagca
cgtgcatataacttagttattccgccaagtggtcgtacattatcaggtggtttagaccct
gcatcgttacacaaaccgaaagcatttttcggtgcggctagaaatatagaagcaggagga
agtttaacaattcttgcaactgcattagttgatacgggttcacgtatggacgatatgatt
tatgaagaatttaaaggaacaggaaatatggagttacatttagatcgtaaattatctgaa
cgtcgtatattcccagctatcgatatcggtcgaagctcaacacgtaaagaagaattgttg
attagtaaatctgaattagatacattatggcaactaagaaatctgttcactgattcaact
gacttcactgaacgttttattagaaagcttaaaaagtcgaagaacaatgaggacttcttc
aaacaattacaaaaatccgcagaagaaagtactaaaacaggtcgtccgataatttaa
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