Saccharolobus shibatae: J5U23_00086
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Entry
J5U23_00086 CDS
T07357
Name
(GenBank) tRNA pseudouridine(13) synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sshi
Saccharolobus shibatae
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sshi03016
]
J5U23_00086
Enzymes [BR:
sshi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
J5U23_00086
Transfer RNA biogenesis [BR:
sshi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5U23_00086
Prokaryotic type
J5U23_00086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QXJ27228
UniProt:
A0A8F5BL02
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All DBs
Position
76348..77481
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AA seq
377 aa
AA seq
DB search
MIPHEIDIVLGMERYYYEDWNEIDGTIERPNGFKVVEEIDFKPAHEWKGEEKGKYAVYLL
TKWGIDHFSVLSEIQKVLHSKVNYMGIKDANAVTSQLVYITLTKKQELINEYKSNSFILK
FLGYSSTKFNHTGNIFEISLLTSNFDLVVERVRQIEKNPYLPAFIGYQRFGTRRPITHLI
GKYLLKRDWEKAFYLILTYPFLSESKEIIEIRKLIMEGDFNEAVRLIPSKFKQEKLLLKN
YMKFNSYYLALKNSFIPISLYLDAYQSYLFNMYLSRRLDEYKNSDDKDNLFIRIPIYFSD
CDDICKEIYLNEGIEKNFFKLPEFKISLKSFNRKAFMNIRNLKINEETRTISFVLDRGMY
ATVLLREILRGDPRKFT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgatccctcatgaaatagacattgtgttaggtatggaaagatattactatgaagattgg
aatgagatagacggaacaatcgaaagaccaaatggatttaaagttgtagaagagattgac
tttaagccagctcatgagtggaaaggtgaggaaaaaggtaaatatgcagtctacttgctc
acaaaatggggaatagatcatttttccgttttatctgagattcagaaagtactacattcg
aaagtgaattatatgggcattaaggatgctaacgcggtaacctctcagttagtgtatata
acgttaaccaaaaagcaagaattgattaatgagtataaatctaatagttttattctaaag
tttcttggatattcttcaacgaagtttaatcataccgggaatatatttgaaatatctttg
ttgacgtcaaatttcgatttagtcgtagaaagagtgagacaaattgagaaaaatccatat
ctccccgcttttataggttatcaacgttttggtactcgtaggcctatcacacatttaata
ggtaaatatctattgaaaagagactgggaaaaagcattctatttgattttgacgtatcct
tttctttctgaatcaaaagagattattgaaattagaaagctaataatggaaggtgatttt
aatgaagcagttagattgattccgtctaagtttaaacaagagaaactattattgaaaaac
tatatgaaatttaattcttattacctagctcttaaaaatagtttcattccaatctcgtta
tatttagacgcatatcaaagttatttatttaacatgtatttatccagaagattagacgag
tataagaactcagatgataaggataatttatttataagaattcctatctattttagtgat
tgtgatgatatttgtaaggagatttatctgaatgagggaatagaaaagaatttttttaaa
ttaccagaatttaaaatttcactaaaaagcttcaatagaaaggcatttatgaatataaga
aatttaaaaattaacgaggaaacaagaacaatatcttttgtattagatagggggatgtac
gctacggtattacttagggaaattttaagaggggatccaagaaaattcacttaa
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