Saccharolobus shibatae: J5U23_00176
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Entry
J5U23_00176 CDS
T07357
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
sshi
Saccharolobus shibatae
Pathway
sshi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J5U23_00176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sshi03021
]
J5U23_00176
Enzymes [BR:
sshi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J5U23_00176
Transcription machinery [BR:
sshi03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
J5U23_00176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_9
Fer4_18
Fer4_10
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
QXJ27312
UniProt:
B8YB56
Structure
PDB
PDBj
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All DBs
Position
154017..154814
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AA seq
265 aa
AA seq
DB search
MSINLLHKDDKRIDLVFEGYPLEFVNAIRRAAMLYVPVMSIDDVYFIENNSPLYDEILAH
RLALIPFTSEEALDTYRWPEECIDCTENCEKCYTKIYIEAEALNEPKMLYSKDIKSEDPS
IVPISGDIPIVLLGANQKISLEARLRLGYGKEHAKFIPVSLAIVRYYPKVEILGNCEKGA
TVCPEGVFELKDGKLSVKNELACTLCEECLRYCNGLIRISSVEDKYILELESVGSLKPER
ILLEAGKSIIRKIEELEKKLVEVIK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattaatttacttcataaggatgataaaaggatagatctagtttttgagggttat
cctttagaatttgtaaatgcaattaggagagcggcgatgctttatgttccagtaatgtct
attgacgatgtatatttcatagagaataacagtcctttatacgatgagatattggcacat
aggttggctttaataccatttacttcagaggaagccttagatacgtatagatggccggaa
gaatgtatcgactgtactgaaaactgtgaaaaatgttatactaagatttacattgaagcg
gaagcgttgaatgagcctaagatgctatactctaaagatataaaatcagaggatccatca
atagttccaatatctggagacataccaattgtgctattaggtgctaatcaaaagatatca
cttgaggctaggttaagattaggctacggaaaagagcacgctaagtttataccagtttct
ttggcaatagttagatactatccgaaagttgagatactaggaaattgtgaaaaaggagct
actgtttgcccagagggggtatttgaattaaaagatggtaaactctcagtaaagaacgag
ttggcctgtaccttgtgtgaagagtgtttaagatattgtaatggcttaattagaatttcg
tctgtagaagataaatatattctggagctagaaagtgtcggatctcttaagccagagaga
attttattagaggctggtaaaagcattattagaaagattgaagaattagagaagaagttg
gtagaggtgattaaatga
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