Saccharolobus shibatae: J5U23_00186
Help
Entry
J5U23_00186 CDS
T07357
Name
(GenBank) Geranylgeranyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sshi
Saccharolobus shibatae
Pathway
sshi00900
Terpenoid backbone biosynthesis
sshi01100
Metabolic pathways
sshi01110
Biosynthesis of secondary metabolites
Module
sshi_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
J5U23_00186
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
J5U23_00186
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sshi01006
]
J5U23_00186
Enzymes [BR:
sshi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
J5U23_00186
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
J5U23_00186
2.5.1.29 geranylgeranyl diphosphate synthase
J5U23_00186
Prenyltransferases [BR:
sshi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
J5U23_00186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
RPW8
CPL
UPF0239
Motif
Other DBs
NCBI-ProteinID:
QXJ27322
UniProt:
A0A8F5BL45
LinkDB
All DBs
Position
160198..161193
Genome browser
AA seq
331 aa
AA seq
DB search
MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGG
DRQRAYKAAAAVEILHNFTLVHDDIMDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFE
ALNEALKGLDGNTFYKAFSVFINSIEIISEGQAMDMSFENRVDVTEEEYMQMIKGKTAML
FSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEKELGKPVYSDIREG
KKTILVIKTLSEATDDEKKILVSTLGNREAKKDDLERASEIIRKYSLQYAYNLAKKYSDL
ALEHLRKIPVYNETAEKALKYLAQFTIERRK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaattaagttcgtattttaatgatatagttaacaatgtaaattttcatata
aaaaattttgtaaagagcaatgttagaacgcttgaggaagcatcgtttcatttatttaca
gctgggggcaaaagacttagacccttaattctggtttcatcgtcagacttaattggcggg
gacaggcaaagggcatataaggcagcagctgccgtggagattcttcacaactttactcta
gttcatgacgatataatggatagggattacctaagaagaggattaccaactgttcatgta
aagtggggtgaaccaatggcaatacttgcaggtgattacttacacgccaaggcttttgaa
gccttaaatgaggctctaaaaggtcttgacgggaatacgttttataaggctttttccgta
tttattaattctatcgagataatatcggaaggtcaagcaatggatatgtcatttgaaaat
agagtagatgtaactgaggaagagtacatgcaaatgataaaaggaaagactgcgatgcta
ttttcatgttctgctgcattaggcggtataattaacaaggctagcgatgatataattaaa
aatttagtcgaatatggattaaatctaggcatatcattccaaatagtggatgatatctta
ggaattattggagacgaaaaggaattagggaaaccagtttacagtgatattagggaaggt
aagaaaacaattcttgttataaaaactttaagtgaagctactgacgatgaaaagaaaatt
ctggtttctacgcttgggaatagggaggctaaaaaggacgatcttgagagagcgtcggaa
ataataaggaagtattcattgcaatatgcatacaatttagctaaaaagtactcagatctt
gcattagaacatttgcgtaaaattccagtttacaatgaaactgctgaaaaggctttaaaa
tatctagcgcagtttaccattgaaaggagaaagtaa
DBGET
integrated database retrieval system
