Saccharolobus shibatae: J5U23_01035
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Entry
J5U23_01035 CDS
T07357
Name
(GenBank) rRNA small subunit pseudouridine methyltransferase Nep1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
sshi
Saccharolobus shibatae
Pathway
sshi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
J5U23_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sshi03009
]
J5U23_01035
Enzymes [BR:
sshi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
J5U23_01035
Ribosome biogenesis [BR:
sshi03009
]
Eukaryotic type
90S particles
Other 90S particles
J5U23_01035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
QXJ28167
UniProt:
A0A8F5BMS8
LinkDB
All DBs
Position
954973..955644
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AA seq
223 aa
AA seq
DB search
MLKYSMHLNIVLLETSLELVPKEIVNHPAVIKNAKRRNKKPEETLLDISLHYHAMKSLEN
SHKRGRPDILHQALLVILTDPVIKGNLFIHTIQSKIIKVNPNMRPPKNYLRFIGLMEQLL
KYGRIPINGNESLMEVTNLTLEEIAARYNLVVLSEKGEKINPEELCKLDEKWILGIGAFP
HGDFSEKILSLAKKIYSISKFQLETQQVLCRIFSACNSILGWP
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatattctatgcatttaaatattgtcttactggaaactagtctagaactagtc
ccaaaagaaatagttaatcatccagctgttattaaaaacgctaaaaggaggaataaaaaa
ccagaagagactttactagacatttccttacattatcatgcaatgaaaagtttagaaaat
agccataaaagaggcagacctgatattttacatcaagccttacttgtaattctaaccgat
ccagtaattaaaggcaatctgtttatacatactatacaatctaagataattaaggtaaat
cccaatatgaggccacctaaaaattatttgaggtttataggtttaatggagcaactattg
aaatatggcagaatccctattaatggcaatgagagtctaatggaagttacaaatcttacg
ctagaggaaattgcggctagatataatttagtagtgttgtcagaaaagggagagaaaata
aatccagaagaactctgtaagttagatgaaaaatggattttgggaataggagcttttcct
catggagacttttctgaaaaaattttgagtttagctaagaaaatctattctataagcaaa
tttcagcttgaaacacaacaggttttatgcagaatcttttccgcctgcaactctatttta
ggttggccttag
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