Saccharolobus shibatae: J5U23_01057
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Entry
J5U23_01057 CDS
T07357
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sshi
Saccharolobus shibatae
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sshi03400
]
J5U23_01057
DNA repair and recombination proteins [BR:
sshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J5U23_01057
Archaeal homologous recombinant proteins
J5U23_01057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_15
AAA_21
AAA_13
TMF_TATA_bd
AAA_27
AAA_29
GAS
SbcC_Walker_B
ABC_tran
ATG17_like
Filament
DASH_Dam1
RsgA_GTPase
DUF3090
DUF2203
Motif
Other DBs
NCBI-ProteinID:
QXJ28189
UniProt:
A0A8F5BMU1
LinkDB
All DBs
Position
complement(972059..974653)
Genome browser
AA seq
864 aa
AA seq
DB search
MRIDKITLTNFLSHEHSEIQFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNLI
RKGSNKASVTLHLSNEKDKIEIIRDIRSTTEDRLIRNQIPVARSATVVSNEIEKILGIDK
DIALSTIIVRQGELDKILENFQDIMGKILKLESIEKLIDSRGPIVEFKKNLENKLRELDR
IEQDYNNSKKNLEEKRNRVLELEKDRKKLEDEIKNLENQITELKKQFEDYEKKRNQYLEL
TTILKVKETKLNELNKSIEELRRQTENMDKLEKEVNELDNLKNFRLKFEKYEVLSRSYME
ISNNILNLEKEIEEYEKAIKRKKELEPHYLRYKELERKLEELQPKYEEYLKSKLNLDSKL
NLKERLDKDASEFSKDIDRIGNLEQIMEEKRKRQLDLRAQLGKVESLISEKNEIINNLSQ
VKGETCPVCGRPLDEGHKQKIVEEAKSYISRLELDKNELEEELKKITDELNKIEKEYRRL
SNNKANYDNIIKQLRKLNEEIENLHNRIEALKDIEEEIKKINGEIKDLKQYYEEFMRLFK
YDEKELERKKVRLDEMNKKKVEIEKEMRVLETELQGLDRKELENKISDLERKKKILDEMK
KKRGVLEDYIGQVELLQEDVKKLKEKLNIIQFDENKYNELKTSLDVHNASLKEKENRKSR
VEGELDSLGKDIEEISNRIKNYELQLKDKEKIINGINKLEKIRDALGERKLQSYIIMATK
QLIENNLNDIISKFDLSIKNVEMEIMQKTSRGKGSGGNIVIYTNNGDTLPIVSLSGGERI
ALSIALRLAIAKALMSNTNFFILDEPTIHLDDQRKAYLIEIIRAAKESVPQILVVTHDEE
VVQAADYVIRVEKRGNKSFVREET
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgacaaaattactttgactaattttttaagtcatgaacacagtgaaatacag
tttctaggcgaaataaatgtaatagtgggacaaaatggagcaggtaagagttctataata
gatggcatagtattcagcttgtttagaacccatagtagaggaaataacgacaacttaata
agaaaaggttcaaataaggcgagcgttaccttacatctttctaatgaaaaagataaaata
gaaataataagggatataagaagcactacagaagataggttaatacggaatcaaatacca
gttgcacgtagtgcaacggtagtctctaatgaaatagagaaaattctgggtattgataaa
gatattgccctatcaacaataatagttagacaaggagaattggataaaattttggagaat
ttccaagacattatggggaaaattctaaagttggaatcaatcgagaagcttattgatagc
agaggtccaatagtggaatttaagaagaatttggaaaacaagttaagagagttagacaga
atagaacaagactataataattctaagaagaacttagaggagaagagaaatagagtgttg
gagttagaaaaagataggaaaaaactggaggatgagataaagaacttggaaaatcaaata
actgagttaaagaaacaattcgaagattatgagaagaaaagaaatcagtacttagagttg
accactatcttaaaggtaaaagaaactaaattaaatgaattaaacaagagtatagaagaa
ctaagaagacaaacggaaaacatggataagcttgaaaaggaggtaaacgaacttgacaat
ttaaagaattttagattaaaatttgaaaaatatgaagttttatcgagaagttatatggag
atatccaataatatacttaatttagaaaaggaaattgaggaatatgaaaaagctatcaaa
agaaagaaagaacttgagccacattatctaagatacaaggaattggagagaaaactggaa
gaattacagccaaaatatgaagaatatctcaaatcgaaattgaatttagactccaaacta
aatttaaaagaacgtttagacaaagacgcaagcgagttttctaaagatatagatagaatt
ggtaatcttgaacaaatcatggaagagaaaagaaaaagacaacttgatcttcgagctcaa
ttaggtaaagttgaaagcctaatatctgagaaaaatgagataataaataatcttagtcaa
gttaagggggaaacttgtccggtatgtggaagacccctagatgagggacacaaacaaaaa
atagtagaagaagcaaaaagttacatttcacgattagaattagataagaatgaactagaa
gaagaattaaagaaaatcactgatgaattaaataaaattgaaaaagaatatagaagactc
tcaaataataaggcaaattacgataatataataaaacaacttagaaagttaaacgaggaa
atagagaatcttcataataggattgaagctttaaaggatatagaggaggaaattaagaaa
ataaatggagaaataaaggacctaaaacagtattatgaagagtttatgagactatttaag
tatgacgagaaggaacttgaaagaaaaaaagtaaggttagatgaaatgaacaagaaaaaa
gtagaaatcgaaaaagaaatgagggttctagaaaccgaattacaagggttagaccgtaaa
gagctggagaataaaatttcagatttagagaggaagaaaaaaatcttggatgaaatgaag
aagaaaagaggagtactagaagactatataggacaagttgagctactacaagaagatgtt
aagaaactaaaggaaaaattaaatatcatacagtttgatgaaaataaatataatgaactt
aaaacgagtttagatgtccataatgccagtcttaaggagaaggaaaacagaaaaagtaga
gtggagggcgaattggatagtttaggtaaagacatagaggagataagtaatcgaattaag
aattatgaattgcaactaaaagataaagaaaagataatcaatggtattaataagctggag
aaaattagagatgcattaggagaacgaaaattacagagttatataatcatggcaacaaaa
caattgattgaaaataatctaaatgatataatatcgaaatttgatctatctattaaaaac
gtagaaatggagataatgcaaaaaactagtagaggaaagggcagtggtgggaatatagta
atatacactaataacggcgatactttgcccatagtatcgcttagcggaggtgagagaatt
gccttatctatagcattaaggttagcaatagctaaggcactgatgagtaatactaacttc
ttcattcttgacgagccaacaattcatttagatgatcaaagaaaagcgtacttaatagag
ataattagggcagcaaaggaaagtgtacctcagatattagtggtaactcatgacgaggag
gtagtccaagcagctgattatgttattcgtgttgaaaagagaggaaataaaagttttgtg
agggaggagacttga
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