Saccharolobus shibatae: J5U23_01136
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Entry
J5U23_01136 CDS
T07357
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
sshi
Saccharolobus shibatae
Pathway
sshi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
J5U23_01136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sshi03019
]
J5U23_01136
03012 Translation factors [BR:
sshi03012
]
J5U23_01136
Messenger RNA biogenesis [BR:
sshi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
J5U23_01136
Translation factors [BR:
sshi03012
]
Eukaryotic type
Release factors
J5U23_01136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
SpoU_sub_bind
Ribosomal_L7Ae
CoV_Methyltr_2
IGPS
Motif
Other DBs
NCBI-ProteinID:
QXJ28267
UniProt:
A0A8F5BMX5
LinkDB
All DBs
Position
1042116..1043168
Genome browser
AA seq
350 aa
AA seq
DB search
MKKWKAPATVLLSLYIPPGRPIPDVVNLLRQEYSIAQNIKLKRTRDAVLSAIGAAIDRLN
KIPKIDGNGLVLFCGENFDTEDFKCFMFSPPDKVPLFFYRTDKEFHVEFLEDMVEDTVVY
GLIIVERDEATIGLLKGTRIEILEEIEGFVPGKHMMGGQSQRRIDRIIDEMYHNFLKEVG
EKVNAYFMPFIQTGKMKGILLGGPGYAKEDFYKEDYVDYRIKNLILQPLIDVSDQGEVGL
REMIMRAEDLLKNQQYVEVEKLLEELKYHLAKDDGLIIYGKEQIKKAMEMGAVEAIVIHE
DSSDKELEKLAQDAENYGVKVFVVGDEVPEAEWVKKTFNGVVGKLRYRLY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaatggaaggcaccagctactgttcttctgtctttgtatataccacccggtaga
ccaattcccgatgtggttaatctacttaggcaagagtactccatagctcagaatataaag
ctcaagaggactagagatgccgtactttccgcgataggtgcggcaatagataggctgaac
aagataccgaagatagatggtaatggtttggtattgttttgcggtgaaaatttcgatact
gaggatttcaaatgttttatgttttctcctcctgataaagttccattattcttctataga
actgacaaggagtttcatgtggaatttttggaggatatggtggaggatactgtagtatat
ggtcttataattgtggagagggatgaggccactataggtttacttaagggaactagaata
gaaattttagaggaaattgaaggttttgtaccagggaagcacatgatgggaggacagtct
cagaggagaattgacagaataatagacgagatgtatcataatttcttaaaagaggttggt
gagaaagtcaatgcgtattttatgccttttattcagactggcaagatgaaaggtatacta
ttaggtggtccaggatatgctaaagaggatttctataaggaagattatgttgactatagg
ataaagaatctaattttacaacctttaattgacgtttctgatcaaggtgaggttggatta
agggaaatgataatgagggctgaggatttattaaagaatcaacaatatgttgaggtggag
aaattactagaggaattaaaatatcatttggctaaggatgatggattaataatatatgga
aaggagcaaattaaaaaagctatggaaatgggagcagtagaggctatagtaattcatgag
gactctagtgataaagagttagagaaattagctcaagatgcggaaaattatggcgttaag
gtttttgtggttggtgatgaagtaccagaggctgaatgggttaaaaaaacgtttaatggt
gtagtgggtaagttaaggtataggctatattaa
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integrated database retrieval system
