Saccharolobus shibatae: J5U23_01256
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Entry
J5U23_01256 CDS
T07357
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sshi
Saccharolobus shibatae
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sshi03400
]
J5U23_01256
Enzymes [BR:
sshi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J5U23_01256
DNA repair and recombination proteins [BR:
sshi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J5U23_01256
Prokaryotic type
J5U23_01256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXJ28387
UniProt:
A0A8F5BN63
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All DBs
Position
complement(1146945..1148246)
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AA seq
433 aa
AA seq
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MLCLFVFRRDLRLDDNTGLIKALEECKKVVPAFILDPRQVGDENQYKSEFALNFMINSLN
ELNDELRKRGSKLYVYYGIAEEVIKNLLKEIDAVYLNEDYTPFSKMRDEKIYKYCEESGK
NIKFFEDYLLASKNDFMNYKSFTTFYNAVKNKRVKKPIHNNYTNYYKNSLGDEYELPPSR
EGRGGRKEAIKLIDRAKQIDYTRRDFVAEDNRTFLSPHLKFGTVSVREVYYSLIDNQAII
RQLYWRDFYTLLAYYNNRVFHEPLRREYNCIEWENNERLLQAWIDGKTGYPIIDAGMRQL
SRTGDMPNRVRMLVAFFLVKVLLIDWRIGEKYFASKLIDYDPSVNNGNWQWVASVGTDYI
FRVFDPWKQQTTYDPEAKYIKRWVDELESYDAEIIHNAYKYTLKNYPKPIVDWRIRVNLA
KRLYEVCRKSKIK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgctctgcctatttgtttttagaagagatctaaggttagatgacaacactggactaatt
aaagctctagaggaatgcaagaaagtcgttcctgcattcatattagaccctcgacaagtt
ggcgatgaaaaccagtacaaatcggaattcgcattaaacttcatgattaactccttaaat
gagctaaatgacgagctaaggaaaaggggatctaagctttacgtctattacggaattgca
gaagaggtaataaagaacttacttaaagagattgacgctgtttatcttaatgaggattac
acaccctttagcaaaatgagagacgaaaaaatttacaaatattgcgaggaaagtggaaaa
aatataaagttttttgaagattacttactcgcttcaaagaacgattttatgaactataag
agctttacaacgttttacaatgcagtgaagaataaacgggtaaagaaacctattcataat
aattacacaaattattataaaaattctttaggagacgaatacgaattaccacctagtaga
gagggaagaggaggaagaaaggaggccattaaattaatagatagagcaaagcaaatcgat
tatactagaagagatttcgtagctgaggataacagaacctttctttcacctcatctgaaa
tttggaactgtatccgtaagagaagtatattattctctgatagataatcaagcaataatt
aggcaattatattggagggatttctataccctattggcttactataataatagagtattt
catgaaccgttaagaagggaatataactgtattgagtgggagaacaatgaaaggctactt
caagcctggattgatggaaaaactggatacccaataatagatgctggaatgaggcaattg
agccggactggcgatatgccaaacagagttagaatgttggtcgcatttttcttagttaag
gttcttttaatagattggagaataggtgagaagtactttgcaagtaaactaattgactat
gatccttcagttaacaatggaaactggcaatgggtagcttcagtaggtactgattatata
tttagagtatttgatccttggaagcaacagactacatatgacccagaggcaaagtatata
aaaaggtgggtagatgaattggaaagctatgacgcagagatcatacataatgcgtacaaa
tatactctgaagaactaccctaaacctatagtagattggagaataagggtaaatctggca
aagagactttacgaggtatgtaggaaatctaaaataaaatag
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