Saccharolobus shibatae: J5U23_02206
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Entry
J5U23_02206 CDS
T07357
Name
(GenBank) Transcription factor S-related protein 3
KO
K03057
transcription factor S
Organism
sshi
Saccharolobus shibatae
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sshi03021
]
J5U23_02206
Transcription machinery [BR:
sshi03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
J5U23_02206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RPB9
Zn_ribbon_IS1595
Zn_Ribbon_TF
Cas12f1-like_TNB
DZR
Zn_Ribbon_1
NMD3
IBR
DUF2387
Zn_ribbon_NUD
C1_1
Zn_ribbon_TiaS
Zn_ribbon_6
DUF6300
PALB2_WD40
SAC9_GBDL_2nd
zf-C2H2_7th_ZNF462
Lar_restr_allev
DUF6980
Auto_anti-p27
AMPK_alpha_AID
DmmA-like_C
Ribosomal_S27
HypA
Prok-RING_1
Ribosomal_L32p
Zn_ribbon_Top1
C1_2
zf-Mss51
Ribosomal_L37e
Zn_ribbon_PaaD
Zn_ribbon_Com
Zn_ribbon_TFIIB
zf-C2H2_FBX41
Motif
Other DBs
NCBI-ProteinID:
QXJ29337
UniProt:
A0A8F5BQ18
LinkDB
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Position
complement(2018750..2019028)
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AA seq
92 aa
AA seq
DB search
MRFCPKCGSLMRVKGNKMVCSKCGYSDHDVEKVILKENINHENDKTIIADGETIEGRVAI
SLCPRCGSVRAILLNKKKRLYRCMACSFVYTI
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttgtcctaaatgcggttccttgatgagggtaaaaggtaacaaaatggtttgt
agtaagtgtggatattctgatcatgatgtagaaaaagtgatattaaaggagaatataaat
catgaaaatgataagacaataatcgcagatggtgaaaccatagagggtagagtcgctatc
tcgctctgtcctagatgcggttcggtgagagctatattgcttaataagaagaaaagattg
tataggtgcatggcttgtagctttgtttacactatttag
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