KEGG   Saccharolobus shibatae: J5U23_02436
Entry
J5U23_02436       CDS       T07357                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
sshi  Saccharolobus shibatae
Pathway
sshi03030  DNA replication
sshi03410  Base excision repair
sshi03420  Nucleotide excision repair
sshi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sshi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J5U23_02436
   03410 Base excision repair
    J5U23_02436
   03420 Nucleotide excision repair
    J5U23_02436
   03430 Mismatch repair
    J5U23_02436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sshi03032]
    J5U23_02436
   03400 DNA repair and recombination proteins [BR:sshi03400]
    J5U23_02436
DNA replication proteins [BR:sshi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    J5U23_02436
DNA repair and recombination proteins [BR:sshi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     J5U23_02436
   MMR (mismatch excision repair)
    Other MMR factors
     J5U23_02436
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    J5U23_02436
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1
Other DBs
NCBI-ProteinID: QXJ29566
UniProt: A0A8F5GU78
LinkDB
Position
complement(2238492..2239229)
AA seq 245 aa
MKAKVIDAVSFSYILRTVGDFLSEANFIVTKEGIRVSGIDPSRVVFLDVFLPSSYFEGFE
VNQDKEIIGFKLEDVNDVLKRVLKDDTLILSSNESKLTLTFDGEFTRSFELPLIQVETTQ
PPSVNLEFPFKAQLLTVTFADIIDELSDLGEVLNIYSKENKLYFEVIGDLATSRVELSTD
SGTLLEASGADANSSYGMEYVVNTTKMRRASDSMELYFGSQIPLKLRFKLPQEGYGDFYI
APRAE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaaagctaaggtaattgatgctgtttcattctcttatattttgaggactgtgggagat
tttctgagtgaagctaactttattgtaactaaagagggtataagagtcagcgggattgac
ccttcaagagtagtttttttagacgtatttttaccgtcgagttactttgagggatttgaa
gttaatcaggataaggaaataataggttttaagttagaagacgtaaatgacgtgctaaaa
cgcgtattaaaggacgatacgttaatactctcttcgaacgaatccaagttaacacttact
tttgatggagaattcactagatcttttgaacttccattaattcaagttgaaaccacacag
ccaccttcagttaatttagagtttccatttaaggcacaactacttactgtaacttttgcg
gacataattgacgaattatctgatttaggtgaagttttgaatatatattccaaggagaat
aaactttattttgaagttattggggacctcgccacctcaagagtagagttgtcaacggat
agtgggacgttattagaagcttcgggtgcagatgccaatagtagttatggaatggaatac
gttgtgaataccactaaaatgagaagagcttccgattcaatggaattatatttcggttct
caaatacctttgaaacttagatttaaattaccgcaagaaggatatggggacttttacatt
gcaccaagggcagagtaa

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