Saccharolobus shibatae: J5U23_02443
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Entry
J5U23_02443 CDS
T07357
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sshi
Saccharolobus shibatae
Brite
KEGG Orthology (KO) [BR:
sshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sshi03016
]
J5U23_02443
Enzymes [BR:
sshi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
J5U23_02443
Transfer RNA biogenesis [BR:
sshi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
J5U23_02443
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QXJ29573
UniProt:
A0A8F5BQR7
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All DBs
Position
2243784..2244368
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AA seq
194 aa
AA seq
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MRLFIGIEVPQSPKLLEIFEIVKNATTDIKLVEPYNIHITLLFLGEVRDDRVEEVKDSMS
GLKFNKFKVTLKGLGAFPNLARPRVVWIGIVEGQQQLRQIRSYILNELLKRKIRPEDDKD
FSPHLTIGRIKSYNSISNLINTINENMNVDIGTFEVNNVVLFKSTLTPKGPIYDKLFEVS
SIDRGGSTEDNKTH
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctttataggcatagaagtaccgcaatccccaaaactgcttgaaatattcgag
atagtaaaaaatgcaacaactgacataaaattggtcgaaccatataacattcatattaca
ctattattcctaggcgaagttagagatgacagagtagaagaagtgaaagattcaatgagc
ggattaaaattcaataaatttaaagttacactaaaaggtttaggggcatttccaaattta
gcaagaccaagagtggtttggattggaattgtcgagggtcaacaacagcttagacagatt
agatcttatatacttaacgagctattaaagcgaaaaataagaccagaagacgataaggat
ttctcaccacatttaacaattggcaggataaaaagctacaactccattagcaacctcata
aatacgattaatgagaatatgaacgtggatattggaacctttgaagttaataatgttgtt
ctttttaaaagcacgttaactccaaaaggtccaatatatgataaactgtttgaagtgagt
tcaattgatagaggaggaagtactgaagataataaaacccactga
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